Ll_transcript_496836

• Id Trinity: TRINITY_DN50291_c0_g3_i3
• Name Transcript: Ll_transcript_496836
• Sequence: TTTACAAGAATAGAAAATCTCACAATGACATTAGAATTACTGGATATATATGACATTTGGAAGTTCTGATGTACTCTTGGAAATTGTCTATTTTGTGTGG TTCTTGAAATTTTGTTTTCCATTTTTTCCAGTGTTTAAATTCCTTTCTCTTTAGGTTGTGGTGATTTCTCTGTTTTCGTGACTTGTTACTGTATCCCCAA CTTAGAATATATGTTTTTAAAGATTATATTAGACACAATAGATGATCTAATTAATTGTACTTTATATTCTATTGCAGCCTACACTTCATAAACCTAGTAT AATGGCGCATGTAGTTCGTGTTTTAAAGGGGGAAAAAACAGTACGGATGCACTACGCAAATTGTAGTACTTACAATGCTGATTTTGACGGTGATGAAATT AATGTTCATTTTCCACAAGATGAAATTTCCCGATCTGAAGCCTACAATATTGTGAATGCCAACAATCAGTATGTGAAGCCTACCAGTGGGGATCCAATCA GAGCCTTGATTCAGGATCATATTGTAAGTGCTGCTCTTCTTACAAAAAGGGATACTTTTTTAAGATGTGAGGAGTTCAACCAACTTCTCTACAGTTCTGG TGTATCCATGGCTGGGATTGGCTCTTTCTGTGGCAAATCTGGGAAGAAAGTATTCATGTTAAGTACCGAGAGTGAAATGCTGATGTTTCCTCCAGCAATA TGGAAGCCAGAGCCGCTATGGACAGGAAAACAGGTTGTCATCTGTTAAGATTCTCCAAATTCATAACACTATAGGCACTATAACAGATTACTATCTAAAT GAATTCAGACAACAATTTTTGTTGTCCTTTTTCCTCTTGTAGTTATTATTTCATAATGGCCGTATGTACATAATGGCTATATTGACAACATCTTGCCCCA CTTGTTCACCATTTACTTCTTCTATTTAGATGACATAATGGCTGTATGTACAATTTGTTTCTGCTGTCTCCCTAGGTTATCAGTGCGTTGCTATACTATA TCACTAAAGGTTCTCCACCATTTACTGTGGAGAAGAATGCAAAAATCCCCTCTAATTTTTTCAAGACTCGAATCAGTGAGGGAAATAAATGCAGTGAAGA TACATCAAGAAAGAAGGACGAGCCTGATGAGGATAAATTGTTGATATATAGAAATGATTTGGTGCGTGGTGTAGTTGATAAGGCTCAATTTGGTGACTAT GGTATGGTGCATACAGTGCAAGAGCTTTATGGCTCAAATGTTGCTGGCAATCTGCTTTCAGCATTAAGTCGTTTATTCACTAACTTTTTACAGATGCATG GGTTCACATGTGGAGTAGATGATCTTCTGATAACAGAAGAAAAGGATGGTGAAAGAATGGCACAACTTGAAAGCTGCGAGGAAATTGGTGACATTGTTCA TCGTGAATTTGTTGGGGTCATGGATAATGCTAGATTAGACCCAATCACACTGCAGTTGAATATTGAGAAAAAAATACGCAGTAATGGAGAAGCAGCATTA ACATACTTAGATAGGAAGATGATAAGTAATCTTAACACCAGGACAAGCTCAGGCATATTAAAGGAGTTACTATCTGAAGGAATATTGAAATCCTCTGGAA AAAATTGGATTTCTCTCATGACTACATCCGGAGCTAAGGGTAGTATGGTCAATTTTCAGCAAATCTCGTCTCATCTAGGCCAGCAAGAGTTGGAAGGAAA ACGAGTTCCACGCATGGTTTCTGGAAAGACCTTGCCATGCTTTACTCCCTGGGATTGTTCTCCTAGAGCAGGAGGGTTCATTATAGATCGTTTTCTCACT GCCCTTCGCCCACAGGAATATTATTTTCATTGCATGGCTGGTCGTGAAGGATTAGTTGATACTGCAGTCAAAACATCTCGGAGTGGTTACCTACAAAGAT GCCTAATGAAAAATCTTGAGTGTCTTAAAGTTAGTTATGATCATACTGTTCGTGATTCTGATGGTTCGGTTATCCAGTTTCACTATGGAGAAGATGGTGT AGATGTCCATCAAACTAGCTTTATCACCAAGTTTGAAGCATTGTCAACTAATAAAGAATTGGTTAATAGCAACTTTTGTCGTCAGCTAGACAAATCCAGT CCTTACATTAACAAGTTGCCTGATGCTCTTGAAAGAAAAGCAAAAAAATTCATTCGTGAGAAACAGAGAAACACTGGTTCAATAAAACGATCAGACTTCT TGAAGTTGATGGAGCACAAGTATATTTCGAGTCTTGCACAGCCTGGAGAGCCAGTTGGTGTGTTAGCTTCTCAGTCTGTTGGAGAACCAGCAACACAGAT GACTTTGAATACGTTCCATCTTGCTGGTCGTGGTGAAATGAATGTGACACTTGGAATTCCACGTCTACAAGAGATCCTAATGGCTGCCGCAAGAGATATC AAGACTCCATTTATGTCATGCCCCTTGACCTTGATACCTGAAAAATCAATGGAAGATGCAATTCGTCTTGCAGATAAGTTGAAGAAGATCACCGTAGCTG ACATAATTGAGAATATGGAAGTGTCTGTTGTACCAGTAGCTGTTCTTGATGGTCAGATTTGCAGTATATATAAGCTTGAGATGAAGCTATACAAGCCTAA ACACTATCCAAAGTACACTGATATAACAATTGCAGACTGGGAGGAAACTCTAAGCGTTGTTTTTGTGAGGGAGTTGGAGGATGCCATTGAGAATCACATG TCATTGCTCTCTAAGATTAGTGGCATACAAAATTTTAAGTCTGATCCACAATCAAGTTCTTCAAATGGTTCAGAAGACGTTGACAGCAATGGATTGGAAT CTGAGAAAAAGGGTCACAATAATGACGAGGACGATGAAGATGGTGGTGAAGATACAGAAGGGGCTGACGATCTTGGTTCAGATGCTCAAAAGCGAAAACA GCAAGGTACTGATGAGGTTGATTACGAGGATGGTGCTGAAGAGGACACACATGACGGTGAGCTATCAGAGGATTTCGAAGATGACGAGGGTGTGGGTGAT GTAAAAGTTAACGAGGATGGGCGTCATGTCATAGTTAACGATAATGATAGTGATATTGAATTTAGTGAGGGTGGTGAGAATGTGCCAAATGATGCCAATA ATTCTCATGAACATGGAATGCAATCCAAGCCGAAGTCTACTAATGAAAAGAATAATTTGGAATCTGGAAAGAAAAAATCTGAATCAACAACAAAAAAATT TGACAGGCGATTTTTTGTTGAAGCGAAAGGGATGAATTTTAAGATCCACTTTAAATTTATCAATGAACCTCACATTTTGTTGGCTCAGATTGCTCAGAAA TCTGCTAAGAAGGTTTGCATCCAGAAGTTTGGAAAGGTTGGCGAATGTAAAGCTATTACATGCAAAGAAAGTGGAGTACTCTACAATGGTGAAGATGAAG GTAAGAAGGATGCAGAGAAAATACCAGCACTTCAGACATCAGGGATACATTTCCAAACATTCTGGGAGTTGCAAGATGATCTTGATGTTAACTATGTTTA TTCAAACAACGTCTCCGAAATGCTAAATGCTTATGGGGTGGAAGCAGCCAGAGAGACCATCATAAGGGAAGTACAAAATGTGTTCAAGTCTTATGGGATA TCAGTAAATATCCGGCATTTGACGCTTATTGCGGACTTTATGACACACTCCGGTAGCTATCGTCCAATGAGCAGAATGGGTAGCATAGCGGACTCCACAT CCCCTTTCATCAAAATGTGCTTTGAGACAGCCTCCAAATTCATTGTTGAAGCAGCTTATCATGGACAAGTGGACACATTGGAAACTCCTTCAGCTAGAGT TTGCCTTGGTTTACCAGTAAAAATGGGAACTGGGTGCCATGAGCTGATCCAGAAGGTGGAAATATGATATAGCTGCCATGTTCCTCAGCTCAGACCTGTG GCAAGATTTTGACACATTACACAACAAAGTTTTGTTTGAAAAAATTAAATTGTCTTGGAGGTAGTGGTATTATTATTGTATTAAATGCCATGCCTGGTGC AATATACAAGTGGTAGAAAGAATAGCTTCTTGTTCCTGTGCCATTTTCCTGATTATTTTAATATATTGTATAACATATTGACATGTAATTTTATTTCAAT GTTTTTACTTAGCTTTGATGATTTAAAGTATACTTTGTGGATGACCTTATTTAAGTTGTATGCAATTACCCATTTTCATAAATTATACATTATTTTCT
• Tissue: pods
• Gene name: LI_gene_176089;
• Additional information: details;

Expression of Ll_transcript_496836

FPKM

• PAB: 0
• PNAB: 0.5
• PS1: 0.2
• PS2: 0.2
• PS3: 0.7
• PW1: 0.2
• PW2: 0.1
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_496836

• Blastp: DNA-directed RNA polymerase I subunit 1 from Arabidopsis with 55.76% of identity
• Blastx: DNA-directed RNA polymerase I subunit 1 from Arabidopsis with 56.35% of identity
• Eggnog: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (By similarity)(COG0086)
• Kegg: Link to kegg annotations (AT3G57660)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019421167.1)
• Pfam: RNA polymerase Rpb1, domain 3 (PF04983.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;