| Id Trinity | TRINITY_DN50308_c4_g2_i5 |
|---|---|
| Name Transcript | Ll_transcript_488735 |
| Sequence | GACTAACTCCAATTTATCTCCCTTCTTCCCCAAATACCAATTCACACCTTCACTTTCCAAAACCAACCTTTTTCAGTTCTTTATTGGGCAACCTCGGATA GAACAAACTGCTGAGAAATAATCCCCACAAGGCAATGGAACATAGCAACCAAACTCAAACTATTTCAACTCTTTCTCCTTTCACTCAACCAATCCGTTGT ATAGTCAAACTGGGAGGGGCTGCAATTACTTGCAAAAATGAGTTAGAGATGATAAATGAGGAGATTCTTCGTAAGGTTTCAGAGCAGCTGAGGCAGGCAA TGATTACATCTTCTGAGAAGCCTCCTGGGATGGACTGGAGCAGGAGACCTGGAAGCTCAGAAATTTGTTGTAACCCTGAAGAATTCGGAGATCATTCAGT CGTGGATTTTAGCCGTTTCATTGTTGTTCATGGAGCAGGTTCTTTTGGGCATTTCCAAGCTAGCAAATCCAGTGTCCACAAAGGACGACTCAATAAACCT CTTGTCAAGGCTGGGTTTGTTGCTACCCGAATTTCTGTAACCACTCTGACTCTTGAAATTATTAGAGCACTAGCCAGAGAGGGCATTCCTTCAGTTGGAA TATCACCTTTCTCATGTGGATGGTTCACAAGGGAGAGACAGGTATCTTCAGCTGATTTATCTTCAGTGGCCAAGGCAATTGATTCTGGTTTTACACCTGT AAGATTGGATTCTTATATTTATACTACTACTTCAAAGCTTTTAGATACTCTTTTGCCATTTTCTTAACCTTTCCTAGCTGTGTACGCGGTCTTCTTTTAT TTCCTTATCTTTCCAAGAAAAGTCATTTTAGTAGTACTTAAAATGTTAGAGTGGTTGGAAATTAGTGAAAACCTGGTTTATCGAGGATGCAGAGTCTTTT ATGAGTAATGCATCTTGAGAAAAAAATAGACCAAAATGTTGGATTCACATAATAGGGTAGTCATATCCGAATTGACATAGTTCCTTACTATACCCTCTTG AGCACTATATTGTTCTTTTTGGATGTCTGGAGGAAATGAATGGTCATATACAGCAGCAATGAAACAAGAGAAAACTTGTTTATTCTTTCTATATAAATCT TAATAAAAGAGGGTGAGCCTAGACGCAACGATATTGTTTCTTACCTTGTGATTTGGAGGTCATGACTCATGAAATCAAATTATGGAAACAGTCTATTCGC TTTCGAGATTAAGGTTGCATACATTTACACTCCACAGACCCGACTAGGTGGGAGCCTCATATACTGAGCTGCCTTTTCTTACACACCTTTATATAACGTT AATGCCATAAAACTAAGTGCTTACATTTTTCTCTCTTTCAATTTACTTTGAAGGTTGCAATTTCTGAAAATTGCCCTCTTTTATTTTATTTTCTTTTCTT TTTACCTCAGTCCGTTGCACTTTGTCTAGGTTTTGCATGGAGATGCAGTGCTTGATGAGATTCTGGTAGAGAAGCTGCGTATTCTGTTTTATTGTTCATC AATAATGGACATATTTTTTTACAGTAGTTTATTTTTCAGGGATGCACTATTTTGAGTGGAGATGTGATCATTAGTCACCTGGCAGCATACTCAAAGCCTG AATATGTTGTTTTCCTGGTATCCACCATATATCATATTTTCCCATTTTTTATATTTGATTTACTACAAAATACAAATAATGCTCTTCTTGTACATACTAA AACCAAATGGTCTTCTAGTGACTATAGATATATATAGTTCCCTTGCAAAATGATGTTTGCATTGAGTTTAGTCTGAAAGTAACATGGACTTAGCTGGTAA AGAATTGTATTCATATGCTAGTCCTTTATGCAAAACAAGAATTTTGCATTATCTTGGATCATAGTACTTGTAACATCCTGTCACAGTATTATCTATCTGA AATTTTAGAAGACATTAGGAGAATGTTTTCCATTAAGCATAGATGAAAGACAGATGTATATGGAGTATACGATCGCCCACCAACAGAACCCGATGCAGTA CTCTTAAAGGAGATTGGTGAGCACTTGTAAATTGTGGTAAACTTGATCTCCACCCACCTTTCTCGTCATGGTTGATTGTCATGTAGCCTTACTTTTTTAA CTATGACAGCTGTTAGTGAAGATGGAAGCTGGTCAGTTGTGAAACCAAAGTTGCAGAATTCAAGTAAGCAGACTTAGTAAATCTTTATTCAGTTTACTTT CACTTCGCGGCGGGATATATTCTGAAGCTATTAGTCCAGTGCACTGTTCTATGAACTTTTTTTAAGATACTTACAATAGTTTAGTTATTTTGCCTGTTCC TTTTGGGGGGTGGGCTTAGACGGGTGCTAAATGACTGAGACATCACGGTTCTGACCTCCGATTACAGTCTTTGTCGGTGTAAAGATTCTTAAGGAGTTTG TTTTAATCGAGCCTGAATTTATGATGACTCTGTAGTGTGAATTCAAGCTGAAGTCACAATAAGGTTCAAGATATTTTATTTTCACTTATAAATCATAAGT TTTCCCTGAGAGGCTAGCTAGCTCACTACCTGAGTTACGACACAAATTTACCTTTATGTGCTATTTCTCTGACTCCATATAAACAATGTCAGAATCTGAG AAGCTAATATATTAATACTATGAAATTACTAATTTAACATTCATGTTTCGATTGGTTATGCGATTCAAGTTATGGATTGAAATTTTCTGGAATGTGTTTT CTACAGTTGAGCTAACTGTTGCAGCTCATGACACAACCGGTGGGATGCAAACAAAGATCTCAGAAGCTGCAATGATAGCAAAACTTGGAATTGATGTCTA CATTGTAAAAGCAGCCACAAGCCACTCATTAAGGGCCCTAACTGGAGATCTTAGACGCGACATTCCCGATGACTGGCTTGGAACAGTCGTTCGATCTTCG AGATAACTCCACCATGACATACCTTTTGCGTGGTTCTCAATCATCAAGGGGATCAGTAATTTGTATTACAGTCATTTCTCTTCCATAAACAACTGACAAA TCATGTGTCATATTGCATATAATAAAGTATGGATATAATAAAGTTTGACACCCAAAATGATTTACTGATGATCATTTGACATTTCTATCTCATGGCTAGG ACTTTTAACTTGGAAGTCCAGTTCTGTAATGTTATACTTTTTTTTGTTGCTATTTTACTTTGGGGATACAAGTTTGGCAACTGATATATTTTCAGTGCTT CTCAGAGTTGCTTGAGAAGTTTGTAAGGATGTTTTAAAATCAGGCATTAGAGCTACTTTTACTTTGGGTTTTCTGCTTTAGAAATAAGCTAAAAGTGCTT TTAGCATACAAAAAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_176226; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_488735
| Blastp | Isopentenyl phosphate kinase from Methanothermobacter with 30.43% of identity |
|---|---|
| Blastx | - |
| Eggnog | Aspartate glutamate uridylate kinase(COG1608) |
| Kegg | Link to kegg annotations (MTH_47) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019459052.1) |
| Pfam | Amino acid kinase family (PF00696.27) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |