| Id Trinity | TRINITY_DN50312_c5_g4_i2 |
|---|---|
| Name Transcript | Ll_transcript_489422 |
| Sequence | CAAAGTCACACACAATAATTCTAATATATTAATCTCAATACCCTTTTTCTCATTCTTCACTATTTTTGTTTGCTTGATCTATTTGATTTGAGTGAGATGC AAGATAATGAAGAAATCCCTTCAACACCTGCCACACCAGGTACACCTGGTGCTCCTCTTTTTGGTGGGTTCAAGTCTGAGAGAAATAATAATAACAATGG AACCATTCATGCTATTGCTAAGAAATCCCTATTGAAGAGTTTCAAATGTTTTAGTGTTCAAGGTTTGGACTTAGAAGATGGTGCTTTACCCAAAGTCTCT TGCTCTTTGCCTCCCCCTCCTGTCCCTCTTGCAAGAAAGGTAGGAGCTGAGTTTATAGGAACATTCATTCTGATGTTTGTTGGAACAGCAGCAGCAATAG TGAACCAAAAGACACATGGGTCAGAGACACTAATAGGATGTGCTGCAACAACAGGTCTTGGTGTTATGGTCATAATCCTCTCAACTGGTCACATCTCTGG TGCTCATCTTAACCCTGCTGTCACCATTTCATTTGCTGCTTTGAAGCACTTCCCTTGGAAGAATGTACCTACATATATTGGTGCACAAGTATTGGCATCA ATATGTGCAGCATTTGCACTGAAAGGGATATATCATCCTTTCATGAATGGAGGAGTCACTGTTCCAACAGTGGGATATGGTCAAGCTTTTGCCTTAGAAT TCATTATCACTTTTAATCTCATGTTCGTTGTCACTGCAGTTGCTACCGACACTAGAGCTGTTGGAGAGCTTGCAGGAATAGCGGTGGGGGCCACTGTAAT GCTGAATATACTCATAGCTGGGCCAGCAACAGGAGGGTCAATGAACCCAGTAAGAACACTTGGCCCAGCAATTGCCACAAACAACTACAAAGCCATTTGG GTTTATCTCATTGCTCCTATTCTTGGTGCTCTTTTTGGGGCAGGTTCCTACACTCTTGTCAAGCTTCCTGATGAAGATGTCAATCCTCAATCTAAGGTCC CTTCAAATCCTGGCAGCTTTAGAAGGTGATAACATTATCACCCTCTATCGAATACGAAACCGAGATCATCTGTCTCCAAGAATGTTCGATTTCATGTCCA TATGAGATATTGCGGAAAGCAAACAAAGAATGAGGGATGTTTGGTACATGTACATATTAGATATTTGTGTCATGATGTATTAGTTTCTTAATAAAAGTTA GTTTTTTTTGTACAATTGGGTTGGGCATTGAATATAAAATATAAGATTATATATTGATGTGAGGGGTATTGAGGGATCTTGTAAGTAATGTATTATATGT AAATATGAGAGAAGTATTGAGATATAAAATCTAATTTATGCAAAAAATTGAGTTTATTGCATGAAATGCTGAAATAAATGAGTGGTGTTTGTTGTATTAG ACATATGTGTTAAGATTTATTTTAAGGAAGTAGTTTTTAATTGCTTAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_176266; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_489422
| Blastp | Aquaporin NIP6-1 from Arabidopsis with 74.2% of identity |
|---|---|
| Blastx | Aquaporin NIP6-1 from Arabidopsis with 78.57% of identity |
| Eggnog | Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity (By similarity)(COG0580) |
| Kegg | Link to kegg annotations (AT1G80760) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019443330.1) |
| Pfam | Major intrinsic protein (PF00230.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |