| Id Trinity | TRINITY_DN50314_c0_g1_i21 |
|---|---|
| Name Transcript | Ll_transcript_490739 |
| Sequence | ATGTAAGTTGCAGTGTCTTTTTCTTTGTTGTTTTTTTCCTCCAACTTTTAACTCTGATCCTTTTTGCAGATAGATGCAGGAGAAAATAAGAGTCTCTTAG TTTTATATTATTTTTCTGAAGAATTAAGATATTGATCTCTTTTCATTCACCTTCTATTCTCTATTTCCTTGCACCTTCAGTTTCTTATTTGGATCAGGTT CGATATTATTTGCACATACCCGGATCTGGCTTTGCTTCAATTTCGTAACTTTTTCTCTCAATTCTTAATATTTAATCTCAAACTTTTTCTGGGTTTGGTT TCTCATATCATTTTTTGGGTTAGCAAAGTTTTTTGTTCCTTGATTGGTCAACATTATTTATAATCATTTATTGGAATTATTAGCTTTGGATTTAGATTTA GTTATGATGACCCTCTTAGTTTTTATTTGTTCTTTCCATTTCAAACTTGCTTGAATAAGTTATTGATGTCATGATTTTTTTTGTATATGGTTTCATCCAC AAGCACTTTTTTTAATGTCTTTCAATGTGTTTTTGTAGAATCTCTTATTGTTTGAACTTTGATTGCTATACAGTGGTGTCTGGCTTATTTGTATTTTCGG ATTTATCTTTGGAAATTCATTGCTTCTCTGTTATTTGAAGCATTCAGCTATGTTGATTTTTTGTGTTGCACAGTAGAAGTGAAGGCATAAAATTTTGCTT ACTACTGCTTCAAACTTCTTTAATGAAAAGATAGTGTTTCTAAATAATTGGTTTTTTGTAACTATAAACTTATATTAGCACAAAGAAAGAATTTGCCTGA AAAAATCTTTTAGTATTCAAGTAACCGCTACGTTGTTGTTGAGAAAGTCTAAGCTTCTCTTGAACCAGCACATGATAAAAAAATGAAGTGGTTGCTATTG GTATTTGTAGTTTGTACATAGCAGTTCAGTTTGCGGTGCGGGCACACTGTTTCTACTGAAAACCAGCTACAATGAAGAAGGCCCTTGGCCAAACTGTTAG GGAACTCAAAAGAGGAGTAAATAAGAAAGTGTTGAAAGTTCCTGGGATAGAACAGAAGGTTCGTGATGCTACCAGCAATGAAGCATGGGGTCCTCATGGA TTACTTCTTGCAGATATTGCTCAGGCATCCAGAAACTATCATGACTACCAAATGATCATGGCAGTAATCTGGAAGCGGATTAATGACACTGGCAAGAATT GGCGGCATGTCTATAAGGCTTTGACGGTACTAGAGTATTTGGTGGGCCATGGGTCAGAGCGAGTCATAGAGGAGATTAAAGAACATGCCTATCAAATATC GACATTGTCCAATTTTCAATATGTTGATTCCAGTGGAAGAGACCAGGGAAACAATGTCAGGAAGAAATCACAGAGTCTTGTTATCCTTGTGAATGATAAA GAAAGAATCATAGAGGTTAGGCAGAAGGCTGCTGCAAACAGGGACAAGTTCCACAACAATTCAGCAGGTGGAATGCCCAGACCCGGTGATAGATATGATG ATGATCGTTACGGAAGCAGAGAGGAAGATAGAAGTGGTTCTGGTTATGGCAGAGAAAGAGAATGGGGCTCTAGAGATGGTGATCAGTATAGTCGTGAGGG AGATCGTTATGGCAGAGATTATGAAGAACGCTCTAGCAGAGATGGCTACAGGGATGATGAGTACAGCGGAAGAAATCAAAGTGTCGATGATTACCAATAT GGCTCGAGAAGCAGAAGTTCTGATGGAGATCATGATCGTGGTTATGATGATGATGTTCAACGTTCATCCCGAGGTAGCAGTGCGAAAGCTGAAAACCGTT CACTGGAAGGAAGGCTAGAACAGAAACTTACAGAGCAAAACGTGGGCGCTCCTCCTAGTTATGAAGAAGTTGTTGGTGAATCTCGAAGCCCTATACACAA TGAGAGGGATGGAGAAACTTCAGCAGCATCTGCTCCAAAAGGCTCTTCTCCAGTAAGTGATAATCCACATCAACCCCCTGCTCCTACAGGATCTTCTCCT CATATGAAGGATGATCCAACCAAAGCAACAGCTGCTGCTGCTACCGGTACCGCTACATCTGGAAACCAGAAAGTTGAGGCTTTTGATGAATTTGATCCCC GTGGCCCTCCATCAGCTGTCCCTGCCACTGCTACTAATGCTGAAATAGACTTATTCGGCACCCTGTCAGAGTCATTCACTTTAAATTCATTGGCTTTAGT GCCTTCTTCACAAGCAACGACTACACCTGAAGGCAATGCAAATCTGGATCCAACAGCTTCCTTTGCAGCAGCACCATCCGCATCCAACAATTTCAATAAG TCTTTTGAAGATCCATTTGGTGACACACCATTTGAGGCTATTCCTTCCGCTGAAACTGCTCCATCTCAACCCCAGATACATCAGAGTCTTGAACCATCCC AGTCAAGTGGTCCTAATGTAGAAGCAGTCTCTAACTTTGGATTTGGAGAGTCATTTTCTGTTGT BLAST |
| Tissue | pods |
| Gene name | LI_gene_176285; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_490739
| Blastp | Clathrin interactor EPSIN 3 from Arabidopsis with 56.55% of identity |
|---|---|
| Blastx | Clathrin interactor EPSIN 3 from Arabidopsis with 53.18% of identity |
| Eggnog | Clathrin interactor 1(ENOG410XSM0) |
| Kegg | Link to kegg annotations (AT3G59290) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019452523.1) |
| Pfam | ENTH domain (PF01417.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |