Id Trinity | TRINITY_DN50314_c0_g1_i3 |
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Name Transcript | Ll_transcript_490718 |
Sequence | ATCCTTTAGTGTATATAGAAGCTTGAGAAAATCAGAGTCTTTCTAATTTTATTTTATTTTCCAGAAGAATTGAGATATCAAAACTCTTCAAATTTTCCAA TCTTTATATTCTCTCTCCTCATACCTTCAGTTTCTTAATTGGATCAGTTTGTAGTTTGTACATAGCAGGGTTCAGTTTGTGGTACTGGGACGTAATTTCT AGTGATAACCAGCTACAATGAAGAAGGCCATTGGTCAAACTGTTAGGGACCTCAAAAGAGGAGTAAATAAGAAAGTGTTGAAAGTTCCTGGCATAGAACA GAAGGTTCTTGATGCTACCAGCAATGAAGCATGGGGTCCTCATGGTTCACTTCTTGCAGATATTGCTCAGGCATCCAGAAACTATCATGAATATCAAATA ATCATGGCAGTAATCTGGAAGCGGATTAATGACACTGGCAAGAATTGGCGGCATGTCTACAAGGCCTTGACGGTACTAGAGTATTTGGTGGGCCATGGGT CAGAACGAGTCATAGAGGAAATTAAAGAACACGCCTATCAAATATCGACATTGTCCAATTTTCAATATGTTGATTCCAGTGGAAGAGACCAGGGAAACAA TGTCAGGAAGAAATCAGAGAGTCTCGTTATCCTCGTGAATGATAAAGAAAGAATCATAGAGGTTAGACAGAAGGCTGCTGCTAACAGGGACAAGTTTCAC AACAATTCAGCAGGTGGAATACCTAGACCAGGTTCATATTCAAGCAGTGGAGCCTATGGTGATAGATATGACAATGATAGTTATGGAAGCAGAGAGGAAG ATAGAAGTGGTTCTGGTTATGGCAGAGAAAGAGAATGGGGCTCTAGAGATGGTGATCGATATAGTCGTGATGGAGATCGTTATGGCAGAGATTATGAAGA ACACCCTAGCAAAGATGGGTACAGGAATGATGAGTATAGCGGAAGAAATCAAAGTTTTGAAGATGATCAATATGGCTCAAGAAGCAGGAGTTCTGATAGA GATCATGATCGTGGTTATGATGATGATGGTCAACATTCATCTCGAGGTAGCAG BLAST |
Tissue | pods |
Gene name | LI_gene_176285; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_490718
Blastp | Clathrin interactor EPSIN 2 from Arabidopsis with 71.94% of identity |
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Blastx | Clathrin interactor EPSIN 2 from Arabidopsis with 73.79% of identity |
Eggnog | Clathrin interactor 1(ENOG410XSM0) |
Kegg | Link to kegg annotations (AT2G43160) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019428520.1) |
Pfam | ENTH domain (PF01417.19) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |