Id Trinity | TRINITY_DN50317_c6_g3_i2 |
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Name Transcript | Ll_transcript_490427 |
Sequence | TGCAAATATCCCATCATTCAAAATTGGTTTTGTCAACCTCTTCCAATAAGTACACTACTACATGATTCCCCACATCAGAAAGAAACACGTACCTTTAGTT CTTTAGCAAACCAAACTCAAAAAAACACAAAGAGAACATAAGAAGAGATTGAAGAAGGAAATTAAAGATTTGAAGGTAGCAAAGAATGGGAAATAGTATA GGAAGGAGTAAAAAAGCAAAGGTGATGAAAATAGATGGAGAGACTTTCAAGGTGAAAACTCCGGCCATAGCAAACGACGTCGTGAAGGACCACCCTGGTC ACGTTCTACTTGATTCTCAAGCAGTCAAACATTTCGGGCTTCGGGCCAAGCCCCTTCAACCTCACCAAGAGTTAAAGCCCAAGAACATTTACTTCCTGGT TGAGTTACCTAAGATTCAAACCGAAGAGGGTGATGATAATAAGGGAACACTGCATAGGAGGGTGAGATCTAGTGGTATTAGTCGCATGAATGCTAAGGAG AGACTCGACCTTTTGATGCTTTCAAAACGCTCCGTTTCTGATTTTGGTGTTGTGAGGGAGCCACCGTTGAATAATATGAGTGTGGATCATGGACCCATGA GGGTCAAGATGAGGATTCCTAAGGCCCAGTTGGAAAAAATGATGGAGGAGAGCAACAATGATGGGGCTGAGGTGGCGGAGAAGATTATGAGTTTGTATAT GAGAACCAATGGCGACGGTGCTGCGGTGGAGGACGGTGGCGTGAATGTGGCCCACAAACTCAATTCCAAGCGACGAGTGGTATGTGATGTTTCTATCATT ATTTGTTATTATTGTTTTATTATCTGTTTATTTCTTCTTTACAATAATGATGTAATAATGTTAGTTCTCTATAAATTTTTTTTTTATATTCTTATACTAA TTTTTGTATCCATGTTACTGAGCTAACTATTAATGAATAAAATATCAACTTGTAATATATTTTATTTTTTATAAATAAAATGATTTAGTAGCGTGTCATT TTCTTTCTAATGTTTGAAAATGATTTGAACTCAATTATTTTTTATCTGTTCGGCTGGTTGGGTTCCCGAATCACGGGCCTTAATTAAGGCGTTGCCTAAT GATGTCGACACAAGTGAAAACAAGGCGCCCGTGGTTGCCTAAGCATGTTCCTTTTCCTGTTGCAGATATCAAGGGTTTATATCTCATTAAAATTGAGTCA TAATTTCCTCACATTATTATCAATTTATCCATAATTTTAATTTATTGGTAATTTAGCATCACCGAGTATATCTTTCACTAAAAAATGAATTAATATTTTT GAGATAGGTAATTATCTCTATAATGAGTATTAATTTTTGGATCAAAACTTTGACCTTTTTACTCGAGTCTTACATAATTAGATAAATGTCTTGTTGGTAT ACACCACTAGAACATCTTGTAATAGTTTTATTTTATTTAAAAGTAAATGTTGATTAATATTTAACATATAGATGATCTATTTTTTAGTACTACTAAGAGT ATTTTTTTCAACTTTTTTGGATAAAAAAATAATTTTTATTGAGTTTGTGTAGATTATCTATTGACAAAGTGTAAAAAATTTATAGGGATTATTCATAAAT ATTAAATCATTTTATTTTATATTTTAAGTATATTTATATTGCGAAAAAGAATGATAGTTTTGACTTTGGTCCATGATGTTGGTTCCTTTTTTATGGTATT CTTATCTGTACTACCTTCACACCTATGTAATAGAATTTTCCATGTTTGAACTTTAAAAAATAAAAAATAAATAGCAAACCCTTTGACTGCCATGTTGCTT GAGGGCAACAATTGCTTGCCATTTGTTTTTTCATATCTCATGCTTTGGATTATCTCTCTGAGTATCCTCTCCATTAATGGAGAGTCAAGTACTCCAAAAA ACAAAAGAAAACACAATATTAAATGACATATTTATCCTTTTAATTATAATAAAATTAAAACTTTGCCTTTAAAAACAAGTATAAAAACATGTACTTGATG GAAAGTATCCTTGTTCTATCTCTGTCTGCAAGCAAGCAAATAGATCCATAGAACAATGCCCAATTTCTGTAGCATTGCATGTTCACTCAATAACAGGATT CCTTCAATATATACTTGTGTGGCACTATGTAACCTACTAACTTATAAAATAATTTGTTATTGCCTTATTGGATACTTCATCTCTTCCATATCTTAAATGA TTTTTAATTGAAACAATTTGAATAAAAAGAAATATGAGGTGAAGTTGAGAAACAATAAAAAAAGTATAGTTGTAAAACAAAGTATAAACATGTCTTGAAT TTCTAAAACATTAAAAGATTTGGAATAGGATGAAAATTAAAAGATAAGAATATATGTAACAGAATAGTACTCCACTGAATTCAAATACCTAAGGGGTGAA CATT BLAST |
Tissue | pods |
Gene name | LI_gene_176329; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_490427
Blastp | Uncharacterized protein At1g66480 from Arabidopsis with 54.8% of identity |
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Blastx | Uncharacterized protein At1g66480 from Arabidopsis with 54.8% of identity |
Eggnog | NA(ENOG41117UA) |
Kegg | Link to kegg annotations (AT1G66480) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019459074.1) |
Pfam | Domain of unknown function (DUF4228) (PF14009.5) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |