| Id Trinity | TRINITY_DN50321_c0_g1_i28 |
|---|---|
| Name Transcript | Ll_transcript_488849 |
| Sequence | TTATAAAGCCCACAACCCTAACGTAATCGCTCACAAAAAACGCGTAAACGAAACGCGGAGTACCAAATCGTCTTCTGAGATATCGATAGCGTTGTTGAGA TCCCAATTGCTCCGTTTCATCTAGGGTTTCCTCAATTTTCCTCCGGTAAGGCCATTCGATACATCTGAATCCTATCGAGGCGTTGCCAATATCTTGGGTT TTGCATCTCTTCTTTCATTCACTCTCCTTTTCCCAATTTCTTTTTTCTTCGTATTTTGTTAATTTTTCGGTTTGATACAATTCGCTGTTTATTGGATTGA GGTAGAAGAATCATAGTTTTAATTGAATTTGTTTTCCGATTTTTGAATCGGGTTGTTTGAATTACTGAATATCGAATCGTTGACCTGTTTTTTTGGGTAG GGTTTTAAAAAATCGAGAATTTTTTGGGGTTGTTGGGTTTGAATACACCTTTTCCTCGATAATTGATTTTTGATTGCGAGGATTTGTTCTTGTGATTGTC AATCACATGGCCGCAGGGCGAAAAAGTGTTTTGCGGAAAAGAGATTCCTTCGAATTTAGTTCCGGAAAGGGACTTGGTCACCATAGCAATGATTCTCCCA GCGTGGAAGTTGATAGATCTTACAACAATTTCACCACCCGTTCTGAAAAGCACTTATTTCATGCTGGAAAGGAGGAGAGAGAAGAAGGTGAGCTCTGTTT TGAACATGATGAAGGTGATGTTCTCACACCGCCGGAGAAGAAGAGAAAGTTTTCACCAATTCTATGGGACCTAGCTGAGAAGGAAGTAAAACTCTCTTCC GAAATTCGGGCTACACAGGATGCTGCTAACAGTCCTAGAGCTGGTGATGTTTTGCAAGAGGGTGTTTCTGAGGTGTCTCCACCAAATTCCTCTTATGTGC CGCCTCAAAAATATTATGGGAACGATAAGGAAGATGGGGATGAAGAAAACAAAGTGAAGGGATGGAACATCACAATGTCAAGATGGGCTTCTGATGGACT TTCTCCAAGGGGTGCTGATGACAAATCCAAAGGTCTCAAAGTGATTTCAAGTCCTGAAATTGGTGAGTTCCAAACAGAATTATCAGAAAGCACAATCACT AGATCATCAGGAACCGGTGGAAGAGATCATTATCTGGGCCGTTCGGTTGATGATACTGATTCTGAAAAGGACTTCCCTACCGACTCCAGGGATGATGCTG GAGAACAGAGTGATCTTAGTGATTCTCCATCTGATTCTGATGATGACAGTGGCTTAGTACATGTGCAGACAAATAGAAACATGTTTCAGAGTTGCAGAAG CATATGTGAGTATGAAATGATTAAGAAAATAAATGAAGGTACTTATGGTGTTGTGTATAAAGCTAGGGATAAGAAGACCGGAGAAGTAGTGGCAATAAAG AAGGTGAAGATGAACATAAGTAGGGATGGCTTTCCATTGTCTGCCTTGAGGGAAATGAACATTCTCTTGTCTTTTGATCATCCTTCCATTGTCGATGTTA AAGAAGTAGCTGTGGATGATTATGATGGTACGTTTATGGTAATGGAATACATGGAGCATGACCTTAAGGAGCTGATGAAGGCAAAAAAGCACCACTTTAG TATAAGTGAAATAAAATCCATGATGAAGCAACTTCTTGAAGGTGTCAAGTATATCCATGACAACTGGGTTATCCATAGGGACTTGAAGACATCAAATATT CTGCTGAACAATGAAGGGCACCTTAAAATATGCGACTTTGGTTTGTCCCGTCAGTATGGAAGTCCATTGAAGCCATATACTCCTGTTGTTGTTACACTAT GGTATAGGGCACCTGAACTTTTGTTAGGCGCTAAGGAATATTCTACAGCAATTGACATGTGGTCAGTGGGTTGCATAATGGCTGAATTAATTTCCAAGGA AGCTCTGTTTGCCGGGAAATCTGAAATGGAACAACTTGATAAGATTGTCCGGACCCTGGGCACACCAGATGAGAAAATTTGGCCTGGGTTATCCAAATTA CCTGGGTCTAAAGGAAAATTTGTTAAGCAACCGTATAGTATATTAAGGAGAAAGTTTCGAGCATCATCTTTCATAGGCTTGCCCGTTCTGTCTGAGCTGG GATTTGACTTGTTGGAAAAGCTTCTAACTTACGACCCTGAAAAGGTATATATATGGTGTTTCATGGATTTAAGTTATGATTGCTGTTTTTGTAACTTTAA AATGAATGATGTATAAGTATAACTTATAAGAATCGTTTTTTGATCTTGCAGAGGATAACTGCAGAAGATGCTCTCCTTCATGATTGGTTTCATGAAGCCC CCCTTCCCAAATCTGATTTCAACCCTATTCTTCCTTCTTGGCGTGGCTAGGACCCAGGTATCTTTGCTGGATGCAGGAAAAACCTGGAACATTTATATTT TTATTGTAGTAATTTCCATCTGGCTAACCAAGCTAATGATCATATACAAAGAATGATGTGATCTCCAAGGGGCTGGGCAGTGGGCTTCATGAGAAGGTGT GGCATTGCACCCGTTTTTTTCTACATTGGAATTCTCTGTATTTCTTGCTAAACGATGTACATATATTTCAGGATCTTCAGTAATAGATAATGAGTTTCTT GCTATGGTATTGTTCTTCGCTTTTGCTATTCTGTGTTTTTTGCTATGGTAATGTTCTCTTGCCCAATGCCATCTTTCTCAAATATTCTGTTTTCTGCACC TCTCAACACACTTCTTTCATTTGATGATCATATAAAAAAATTGTGATTGACTTTTACATTAGAAGCTACAGATCTACATGTCATTGGGAAGTGACCTGGA AATGACATTGTACGGGTGCCTTATTTTTTCTTCACTGCAATTTAGTGTATCCTCTTTGCAATGGTATTGCATTAGTTTTTTTGCTGAAAGATGTATATAT ATTCCAGGATGTTCAGTAACTAATGACGAGTTTATTGTTATGGTAACGCTTCTATCTTTTGTTGTCCTTTTCCGATTTTTTCTTTTGGTCACCCTTTTTT GTTATCATTTCTAACTCTCTTACGAAGCTAGTGATCACAAACATACCTGTCCATGGTTGAGATGGACATGGCAGTTGATTAAAAGCAGCAGATTGATGTG ACCTGAAAAGGTGTGACAGTAATATAATACACGTTTTTATCCCCCCCCCCCCCTCAAATGAAAATTCAGTGTTTATTATGTTTTGGTATATTTTTTGCTA TGATATGATGATAATGTTCTTTCCCTAGACCACCCTTCTCATTGTTTCATATCCACATACTATTTTTTGTTATTGTTATAATATAATTGGTTTACCCAGT TAGTGATAATCTACAATGAGATAATGATGCGATAGCAGAGAGGACGAAGTGATGGGACTGAATGGTTTGTTACTCGATTATGAGATTGACAATGGTGACA AGAGGTTTGGCCTGCTGTACCTGTTTTTTTACATTTATTTCATTACATTCTCTCTTCCAGAGTGTATTGCTTTCAAGAAACCATGTACGTATATTTCAGG CTATTTCATTTCACCAAGCATTTCTCTTCCCTTTAAAAACCAATTCTCAAACTGTATTTGATTTTTTAAATGAAATTAAATTGTTGAGGGAGCATGTATG GATAAATTCTGGGTAATGATATATCCCTCCTAAGTAGTGTATAAATTAGATTTTTCCATTAAATTATAATGATGAATTTTGTATTGACCGGAAGTACATG TATGTGATGTGATCCTGCTCACATAGAATAGAAGTACATAAACTAGTTATAATTTCATATAAAACCTTAAGAAGCAACTTCTTAAAATAACCAAACATTA AAAAGAAAAATGAGTTAGTTTCCCGTGTGAAAATTTATAAAAACAATTCTCTCAATAAGAGGCTGATGCAGCATGCTATATTCATCTCATTCCTTCAGTG TACGGAACATTTGCTTTCTTGATACATGGGAGGGAGGTCGTTAACATAATAAAAAGGTGTTTACTTCTACAAATTCCGTAGTGTCAATAATTTACCTAAT TGATCATATAATGAAATATAATGACTATGTTTTGATTCAGTTTTTAGGTAGATCTTACAACGTACCCTATATATTTTTAGTCTTTGGGATTACGTAAACC CACAAGAGATCCCTTTTTGGGTTTCCATGGATAAATTTTTTTAGGAAACAATTGCTTAATAACTTGGGTAACCGGTTTCTTCCAGGAAGCAAAAATTGCA GTGTATCCTCTTTGCAATGGTATTGCGTTAGTTTTTTTTGCTGAAAGATGTATATATATTCCAGGATGTTCAGTAACTAATGACGACTTTATTGTTATGC TAACACTTCTATCTTCTGTTGTACTTTTCCGAATTTTTGTTTTGGTCACCCCTTTTTTGTTATCATTGCAAAATTCGCAGTAGAGAGAGAAAGACTTGGC TGTAATAATCAAATAAATTTTTTACAATACATTAAAATTTTCATTCTAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_176373; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_488849
| Blastp | Cyclin-dependent kinase G-2 from Oryza sativa with 52.78% of identity |
|---|---|
| Blastx | Cyclin-dependent kinase G-2 from Oryza sativa with 52.59% of identity |
| Eggnog | Cyclin-dependent kinase(ENOG410XQ50) |
| Kegg | Link to kegg annotations (4336224) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019463064.1) |
| Pfam | Protein kinase domain (PF00069.24) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |