Ll_transcript_488824

• Id Trinity: TRINITY_DN50321_c0_g1_i8
• Name Transcript: Ll_transcript_488824
• Sequence: CACGGTTTTTATTTGCTTTTTGGGCAGAGATGGGTTATTTATAAAGCCCACACCATACCCTCAATAATTCGCTCAAACGCATATTACGAACCAAGGCGGC TTCTGAGGTCTCGATAGCGTTTTTCAGATCCCAATTCTTCTTTTCATCTAGGGTTTCCTCTATTTGCCTACGGTAAGATCATTAGGTATCTCTGAATCTT ATTGAGAAGCTGCAACGATCTACGGTTTTGTTCCTCATCTTTCATTCATTCCCCTTTTCGCAGTTTTAGGCTTTCATATTTTGTTAGTTCTCGATTTGAT ACAATTGATCTTGATTGTCCAATCGAATCCTTCACCTGTTTTTGGAGGCTAGGGTTTGGTAATTTTGGGAACTTGTGTGGGTTTTATCGAATCAAATCCT TGTTCTGTTTTTCGGGCTAGGGTTTGGAATTTTGAGAACTTTTAGGGTTGTTGGGTTTGGGATACATATTTTCTTCGATTATTGATTTCTGATTGAGAGG ACTTGTGCTTGTGCTTGTCAATAACATGGCGGCAGGGCGAAAAAGTGTTTTGAGGAAAAGTGATTCTTTGGCGAATGGTTCTGTCAAGGAGCATAGGAAT GATTCCTGCGGCATGGAAGTTGATGAATCTTTTTACAGTTTCCATGCCACCCGCACTGCAAAGCAAGTGTTTCACGGTGGAAAAGAGGAGAGAGAAGAAG GTGAGCTTTGTTTTGAACACGGGGAAGCTGACACGGATGAAGTTCTCCCACCACTGGAGAAGAAGAAAAGGATCTCACCAATTGTATGGGATCTAGCTGA GGAGGAAGTGAAAGTCTCTTTCAAAATCAGGGTTACACAAGTAAGGTCCTCAAACATGCCACCTCAAAAATATCTTGAGAATGATGTGGAAGATGTGGAT GAGGATGAAGAGAACAAAGTGAAGGGATGGAACATCACAATGTCAAGATGGGCTTCTGATGGTCTTTCACCAATGAGCACTGATGATAAATCGAAAGGTC TCAAAGTGATTTCAAGTGTTGAGACTGATGAATTCCAAAGAGAACTTTCAGAAAGTACAATCACTAGATCATCAGGAAGTTGTGGAAGAGATAGTTGTCT TGGTCGTTCTACCTCTGATTCTGTTTCTGATAAGGAGTTCTGTGGTGACTCCATGTATGGTGTAGGAGAACGAAGTGACATGAGTGATTCTCCTGATTCT GACGAAGACGATGGCTCAGTGGATGTGCGGACAGATAGAAACATGTTCCAGAGCTGCAGAAGTATATGTGAGTTTGAAATGATTAAGAAGATAAATGAGG GTACTTACGGTGTTGTCTATAAAGCTAGGGATAAGAAGACTGGTGAAATAGTGGCAATAAAGAAGGTGAAGATGAACATAAGTAGGGATGGCTTTCCAGT GTCAGCGTTGCGGGAAATGAGCATTCTGTTGTCTTTTAATCATCCTTCTATTATTGGTGTTAAAGAAGTAGCTGTGGATGATTATGATGGTACCTTTATG GTAATGGAGTACATGGAGCATGACCTTAAGGAGCTGATGAAAGAAAAAAAACAGCCCTTTAGTATAGGTGAAATAAAATCCATGATGAAGCAACTTCTTG AAGGTGTCAAGTATATCCATGACAACTGGGTTATCCATAGGGACTTGAAGACATCAAATATTCTGCTGAACAATGAAGGGCACCTTAAAATATGCGACTT TGGTTTGTCCCGTCAGTATGGAAGTCCATTGAAGCCATATACTCCTGTTGTTGTTACACTATGGTATAGGGCACCTGAACTTTTGTTAGGCGCTAAGGAA TATTCTACAGCAATTGACATGTGGTCAGTGGGTTGCATAATGGCTGAATTAATTTCCAAGGAAGCTCTGTTTGCCGGGAAATCTGAAATGGAACAACTTG ATAAGATTGTCCGGACCCTGGGCACACCAGATGAGAAAATTTGGCCTGGGTTATCCAAATTACCTGGGTCTAAAGGAAAATTTGTTAAGCAACCGTATAG TATATTAAGGAGAAAGTTTCGAGCATCATCTTTCATAGGCTTGCCCGTTCTGTCTGAGCTGGGATTTGACTTGTTGGAAAAGCTTCTAACTTACGACCCT GAAAAGAGGATAACTGCAGAAGATGCTCTCCTTCATGATTGGTTTCATGAAGCCCCCCTTCCCAAATCTGATTTCAACCCTATTCTTCCTTCTTGGCGTG GCTAGGACCCAGAATGATGTGATCTCCAAGGGGCTGGGCAGTGGGCTTCATGAGAAGGTGTGGCATTGCACCCGTTTTTTTCTACATTGGAATTCTCTGT ATTTCTTGCTAAACGATGTACATATATTTCAGGATCTTCAGTAATAGATAATGAGTTTCTTGCTATGGTATTGTTCTTCGCTTTTGCTATTCTGTGTTTT TTGCTATGGTAATGTTCTCTTGCCCAATGCCATCTTTCTCAAATATTCTGTTTTCTGCACCTCTCAACACACTTCTTTCATTTGATGATCATATAAAAAA ATTGTGATTGACTTTTACATTAGAAGCTACAGATCTACATGTCATTGGGAAGTGACCTGGAAATGACATTGTACGGGTGCCTTATTTTTTCTTCACTGCA ATTTAGTGTATCCTCTTTGCAATGGTATTGCATTAGTTTTTTTGCTGAAAGATGTATATATATTCCAGGATGTTCAGTAACTAATGACGAGTTTATTGTT ATGGTAACGCTTCTATCTTTTGTTGTCCTTTTCCGATTTTTTCTTTTGGTCACCCTTTTTTGTTATCATTTCTAACTCTCTTACGAAGCTAGTGATCACA AACATACCTGTCCATGGTTGAGATGGACATGGCAGTTGATTAAAAGCAGCAGATTGATGTGACCTGAAAAGGTGTGACAGTAATATAATACACGTTTTTA TCCCCCCCCCCCCCTCAAATGAAAATTCAGTGTTTATTATGTTTTGGTATATTTTTTGCTATGATATGATGATAATGTTCTTTCCCTAGACCACCCTTCT CATTGTTTCATATCCACATACTATTTTTTGTTATTGTTATAATATAATTGGTTTACCCAGTTAGTGATAATCTACAATGAGATAATGATGCGATAGCAGA GAGGACGAAGTGATGGGACTGAATGGTTTGTTACTCGATTATGAGATTGACAATGGTGACAAGAGGTTTGGCCTGCTGTACCTGTTTTTTTACATTTATT TCATTACATTCTCTCTTCCAGAGTGTATTGCTTTCAAGAAACCATGTACGTATATTTCAGGCTATTTCATTTCACCAAGCATTTCTCTTCCCTTTAAAAA CCAATTCTCAAACTGTATTTGATTTTTTAAATGAAATTAAATTGTTGAGGGAGCATGTATGGATAAATTCTGGGTAATGATATATCCCTCCTAAGTAGTG TATAAATTAGATTTTTCCATTAAATTATAATGATGAATTTTGTATTGACCGGAAGTACATGTATGTGATGTGATCCTGCTCACATAGAATAGAAGTACAT AAACTAGTTATAATTTCATATAAAACCTTAAGAAGCAACTTCTTAAAATAACCAAACATTAAAAAGAAAAATGAGTTAGTTTCCCGTGTGAAAATTTATA AAAACAATTCTCTCAATAAGAGGCTGATGCAGCATGCTATATTCATCTCATTCCTTCAGTGTACGGAACATTTGCTTTCTTGATACATGGGAGGGAGGTC GTTAACATAATAAAAAGGTGTTTACTTCTACAAATTCCGTAGTGTCAATAATTTACCTAATTGATCATATAATGAAATATAATGACTATGTTTTGATTCA GTTTTTAGGTAGATCTTACAACGTACCCTATATATTTTTAGTCTTTGGGATTACGTAAACCCACAAGAGATCCCTTTTTGGGTTTCCATGGATAAATTTT TTTAGGAAACAATTGCTTAATAACTTGGGTAACCGGTTTCTTCCAGGAAGCAAAAATTGCAGTGTATCCTCTTTGCAATGGTATTGCGTTAGTTTTTTTT GCTGAAAGATGTATATATATTCCAGGATGTTCAGTAACTAATGACGACTTTATTGTTATGCTAACACTTCTATCTTCTGTTGTACTTTTCCGAATTTTTG TTTTGGTCACCCCTTTTTTGTTATCATTGCAAAATTCGCAGTAGAGAGAGAAAGACTTGGCTGTAATAATCAAATAAATTTTTTACAATACATTAAAATT TTCATTCTAAA
• Tissue: pods
• Gene name: LI_gene_176373;
• Additional information: details;

Expression of Ll_transcript_488824

FPKM

• PAB: 0.2
• PNAB: 0.7
• PS1: 0.4
• PS2: 0.2
• PS3: 0.8
• PW1: 0.9
• PW2: 0.2
• PW3: 0.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_488824

• Blastp: Cyclin-dependent kinase G-2 from Oryza sativa with 73.44% of identity
• Blastx: Cyclin-dependent kinase G-2 from Oryza sativa with 73.44% of identity
• Eggnog: Cyclin-dependent kinase(ENOG410XQ50)
• Kegg: Link to kegg annotations (4336224)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019463626.1)
• Pfam: Protein kinase domain (PF00069.24)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;