| Id Trinity | TRINITY_DN50323_c0_g1_i7 |
|---|---|
| Name Transcript | Ll_transcript_489676 |
| Sequence | GCTCTCGGAAACAAAAAAAAATGTATTTTCAGAAAACTCACGGAAACAAAAAAAGGCCTTTTCAGAAAACTCTCGGAAACAAAAAAAAAGGTCTTTTGAG AATACTCTCAGAACGAAAAAGGTCTACCTTGAATCCTGCAGCATAGAGGTTACCTCATGTGTGTAGTGATCATGGCCTGAATAGAGGTTCTCTATGATCT ACTTGTGTCACCCATTTCAGTACTTAATATCATTTGTGTGCTTGTCAATTCAATGACCTGACAATTTGTTGTCATAGTGGATAGAGTTTTTGATGGGCCT GTATTGAAGAGTTAAATGTAATTATTTCATGTTTTTTTCATAGTAAGTCTTCTCCATATTTCTATTTTAGTTTTACTAACCCTTTCAATTTTTCAATTAT TGGATCAACGTCGTTGACTTGCATTGACAAATCATGATTTACGGAATTTCCACCATCTTTTCGCGTTCTGTGTATATATGGTTCTTGTATTTGATATTTT GAAGTAACGATTGTGGTTCATTTTTTATCATCCTGAATCGAGGGAATTAACACATACACCGAACTTTTAGAATATTAATGCCCAAACATTTATCACCGAG ACCAATCTGCCCCGAATTGGAAAAATATTTATACATACCACTGCCGACGAGTTTAAAGGTGCTTTGTGTCTGTTTCTACTTTCTTCTAGCCAGTTAATGA GGATGGATTCACTTCTAAAACAGTCCATAATGACTTCTTATTCATTATAAGTAAGGTTTTAAACTGCGGTTGTATTTAGCATTGCATTTACCACAACTAT GGGAAAATGCGGCCACTCAATTTTGGTTGTGACATGGTTGTAGAGATTAAGCGCCTTAATTGTGGTTTCGGACCTCACTTTAAGATATTGATTATAAGGA TTAAGGAAGGGCAAATCGGGGATATCTTACTCTGCCTTATTATGTTGTTTTCTGTCCTCGTTTTTTCCACAATCATTGGACTTGAGTGGAATGTTGACTC ATAGTGTCTTCTATGCCAACATGTGTTGATCCAAGTGGAAGGAGATTGGATCCCTTTACCTTAACCATGTGGTCTTGGGTTCGAGATCAAGATTCATGTG TGTAGGGAAGAAAACATAAACACCATTGAGAGTGGTCTTCACTTAGTCACATGACTGTAACATGTGAGATTATTCTCTATTCTATCGGGTGGGAGGATGC TCTCGGAAACAAAAAAAAATGTATTTTCAGAAAACTCACGGAAACAAAAAAAGGCCTTTTCAGAAAACTCTCGGAAACAAAAAAAAGGTCTTTTGAGAAT ACTCTCAGAACGAAAAAGGTCTACCTTGAATCCTGCAGCATAGAGGTTACCTCATGTGTGTAGTGATCATGGCCTGAATAGAGGTTCTCTATGATCTACT TGTGTCACCCATTTCAGTACTTAATATCATTTGTGTGCTTGTCAATTCAATGACCTGACAATTTGTTGTCATAGTGGATAGAGTTTTTGATGGGCCTGTA TTGAAGAGTTAAATGTAATTATTTCATGTTTTTTTCATAGTAATCTTATAATATCCTATTGTCTAATTCTAGTGCGCCATGTGCATCATACCTGCTCCGC AAACGAGCACTTTACAATGACATGTCAAGATACACTTGCTGTGGTGGTTATATGCCCTGCAGTGGTCGGTGTGGGGAAAGTAAATGTCCTGAATTCTGCC TTTGCACAGAGGTTTTCCTCTGCTTTGGAAATTCAGTGGCCTCAACTCGATTTATGTTGCAAGACGAATTTAACATTCAAACTACCCAATGTGATAATTG CATTATTGGTTTCATGTTTTGCCTTCAACAACTTGCATGCATATTTTCTATTGTTGCCATGATTGTGGGAAGTGAAGAAATTTCAGAGGCTTCTCAGTTA CTATCCTGCTTAGCTGACTTTGTATACTGCACGGTCTGTGCTTGCATGAAGGTAAGTTTATAACTTATTACTCACCAATGGTTAGTTGTTATATCATACA AGTGTTTACAATTCATCCAAAATGGCATATGAATTTTATTTGCAGACTCAGCATAAGGTTGAAATGGACAAGCGTGATGGTTGTGTGCTGCCTCTGTTAT CTAGAAAATTTTTGTTCGGACAAAAAACCAGCTGCTGTAAATTGGATTGAGGGACGAGGGAAATCAGTTTTTTTGTGAAGCAATTATCAAAGAAGAAGTG GTGGAGAAGGTGTTGAAGACCAATGTGGCTGCGCTCGTGGAGCTTAACATGCTCAAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_176388; |
| Additional information | - |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_489676
| Blastp | - |
|---|---|
| Blastx | 3-hydroxy-3-methylglutaryl-coenzyme A reductase 2 from Capsicum with 47.62% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019444659.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |