| Id Trinity | TRINITY_DN50326_c3_g1_i11 |
|---|---|
| Name Transcript | Ll_transcript_490125 |
| Sequence | TATTTTGCTTTGCACAATGAACTTTAAGAACACACCATGTTATAGTGAAATTCAAAATTCAAAACCCATTAATGTCTCTCTCTTGGGTTTCCATTCTGTG TGAAGAAAAGTGAAAATGTTACGCTTTCTCTTCTTCATCTCCATCCAAAGCTTTTCTCTCCGCAACATTCCCATCAAATTCCACTTCACTTCATCGATTG CTTTACAAGGCGCTGCTCTCCGCGGTATTCCCATCAAAATCCACTGCACCAGACCGAGCGTACCATTGCCTGAGTTGAATTCTTCGATAGGAAGCCTATA GCATCAATGGAGGGGAATATTCAGCCCAGCAAGACTTTATGGATAGGTTTCCCCCCTTCTTTTCGGATGGATGAACAGATGCTCCATAATGCATTGATAC TGTTCGGCGAGATCAATAGAATCAGGAGTTTTCCATCAAAAAATTGTTCGTTTGTTGAATTCAGAAGCATTGATGAAGCTCGGTGTGCCAAAGAGGGTCT TCAAGGACGGCTATTTAATGATCCTCAAATATTGATCAAGTATTCTAGCAGTGAGTTGCCACCTGGAAAAGATTACTCGGGCTTTTATCCTGGAATTAAA GGGCCAAGACCTGATGTGCTACTTAATGAGCATCCATTTCGGCCACCACAGATGGATATGTTTGGCCATAATCGTCCTACGGTTCCAAATAATTTTCCTG AACAGCTGCCACCTAGTGGTAATTTTCCACCAATTGCATCAATTCGATCTTTCGGTCCTCAAGGCTTTGAACCTCCTATCTCTGGACCTGCGTTTAATGA GATGGGCACAATCCACAATTTTCAGGATGGTAGCTCCAAAAGTCAGATAGTTCCAAACTGGAAAAGACCATTCCCTCATGCACCAGAAATGCTTTCTTCT CCGGTGCCAGGTACTAGGCCTCCTACCAGGTCCGCCTCTGGTGCAAGTGATGTACATGGCATAAACCAGTTTCCGAGAGATTCTAAACGCTCAAGGATAG ATGGTGGTTTGCTCGTTCATGATGCTCCATTTCCTTTAAGGAATATAAATGGAGGTGTTATTGATCCAAAGAGTCAGCATGGTCCAGTGGGCATATATGG CGTACCTGGTTCAACCCTATCTGATACAGATCATATATGGCGTGGAATGATTGCAAAAGCAGGAACACTTGTTTGTCGTGCTAGATGTGTGCCTATCGGG ACAGGGATAGGGACTGAGCTTCCTCATGTTGTTGACTGCACAGCTAGGACGACGTTGGATATGCTCACAAAATACTATGCTGATGCAATTGGTTTTGGTA CCATCTTCTTTCTCCCCGATAGTGAGGAGGATTTTGCTTCGTACACTGAATTTCTTTGCTACCTCAAATCCCAAAACCGGGCTGGTGTTGCAAAGTGTAT TGATAATACCACTTTATTCTTGGTACCTCCTTCTGATTTCCTAACCAAAGTTTTGAAAGTCACAGGGCCTGAACGTCTGTACGGCGTGATTCTTAAATTT CCAAGTGATGTGTCAATGCAACAAGCAACACATTTGCCTGCACCCTCAACTCAGTACATGCAGCAGATACCTCCTTCGCAAACTGAGTATGGTTTGATCT CTGCAAAGGGACAGCAGGTTTTGACAATGGATTATAACAGAATGTCGCATGTGGATTCCAAACTTCCTCCAAAACCATTTCATCCAGTCACAACTGGCCC TCCTTCAGTCCATTCTGTTCCTCCTGATTATCCGCCTCATGCTGTTTCTGCGTTGCAAGCTGGAGTTACATTGACACCGGAGCTTATTGCAACATTAACT TCCTTGCTCCCTGCAGGTACACAATCATCTACAATTGATTGGGCAAAGACAGCAGCAGGCTCCTCGACTGTGCAACCACCATTTCCTTCAGTTGCACCTA ATGATGGAAACCTATCTTATTTGAGGAAACAGGATCATCAAATTGGAAATCCATCTAGTCATCCTTCTCAACAGTTTGGGAGTATGTATAACGTTCCCAG TGCTCAATATCAGCATTATCCATCAGCACCTACTCCTGGCCACCCTGCTCAAGTGGTCCCTGGCAATTATTATTTCCAAGATACTGCTGCCAGCCTGCAG CAGCAAGGTACTGTTTCATCTGGACCAGTGAATAATTTCATTGTTCCTTCTCAAAGTGGACAGGTAGTTGTACCTCCTCAACTCAATCAGCAGTATCCCA TTGAAGTCTCCTCCAGCACCCAGAATGGCTATGGAATGGTTCAGGGAACAGATGCCTCTGCATTATATAGTTCTCAGGCTTTTCAGCAACCTTATAATCC AGTTGCCTCATTTAATCAAGTTCCGGATGCTAATCCTTCACAACAACAAACTGTGTTGCCCTACACAGCAGACAACGTGAACTCAGAGCCTCCCAGTCAG CAACTGCATTCTGCTAATTTTGGAGTTGGTCAGGGTGCATCAGAAGTGGAGGCTGATAGGAACCAGAGGTATCAGGCAGCGCTACAGCTTGCTTCCAGCC TCCTCCAGCAGATACAGCAAAAGCAAACTGATGGAGGGCATGGCCCAGGAAATCAACAATGAGAATTGTTCTCTGTGATGGTTGCATGGAGCAGTAAGAA GATGAATGTCATAGTGCTACAAAATGTGACTTACATGGACACATTCATAGACTCCTCTCTAAAGTATATACATATTTGTTTTCATCTTGGATTTTGGTTG CATCTAAATTCTGCATTTTCATGGATTAATTACATTGCTTATTCTGTTTCTAGACAGAAGATCCCTTTGGATAGTTTTTTTGTGGTATTATCAAGGGTAT CCTCTTACCCTTTGGATAGTTTTTTTGTGGTATTATTAAGGGTATCCTCTTACCCTTTGGATAGTTTTTTGTGGTATTATTAAGGGTATCCTCTTACCTT TTGGATAGTTTATTACAGTACTTTAATGTTTGAACCAATTAAAGTTTGCCGGATCTTATTTTGTTTAAAAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_176408; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_490125
| Blastp | Flowering time control protein FPA from Arabidopsis with 39.3% of identity |
|---|---|
| Blastx | Flowering time control protein FPA from Arabidopsis with 39.03% of identity |
| Eggnog | Rna-binding protein(COG0724) |
| Kegg | Link to kegg annotations (AT2G43410) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019448259.1) |
| Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (PF00076.21) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |