Ll_transcript_490129

• Id Trinity: TRINITY_DN50326_c3_g1_i13
• Name Transcript: Ll_transcript_490129
• Sequence: TATCCATCTTCTCTCTCCTAGGGTTTCCTCCGCAGTAAAAATTTTCTCATCCCCAAACCTTTCATTATTTTTCCTCTCAATTTTTCATTTCTATACATTT CCTTTTTCTTCAATCATCCGATTCTAATGCCGCTTCCGATTAAATCAATGAGGCCTGCTCATGGCGGTGGCGGCAAGGATTTCGACGACGTTCCTCCTTC GAACAACCTATGGGTTGGTAATCTAGCGCCGAGTGTAACCGACTCCGATCTGATGAATCTGTTCGCACAATACGGCGCTTTAGATAGCGTCACATCGTAT TCGTCTCGGAGTTACGCTTTCGTTTTCTTCAAGCGCGTTGAAGATGCTAAATCCGCCAAGAACAATCTACAAGGATTCGCTCTCCGTGGCAATTACTTGA AGATTGAGTTTGCGAGACCGGCGAAGCCATGTAAACAGCTTTGGGTGGGTGGTATTAGCACGGCTGTCACAAAGGAAGAATTAGAAGCTGAATTTTGTAA ATTTGGTAAAGTTGAGGAGTTTAAGTTCTTCAGAGACCGAAATACTGCTTGTGTTGAATTTTTCAATTTGGACGATGCTACTCAAGCTATGAAAATAATG AATGGAAAACGTATGGGTGGAGACCATTTACGTGTAGACTTTCTTCGATCTAACACTTTGAAAAAAGATCAGATGCTTGATTATGGGCAATTTCAGGGAA AAAGCTTTGGCCACACTGATTCCTATACTGGACAGAAAAGACCACTGAATTCACAACTTCCAATGGGGAGGAAGGGCGATAGTCAACCTAGCAATGTTTT GTGGATAGGTTATCCTCCTGATGTTCAGATTGATGAGCAAATGCTCCACAACGCCATGATTTTATTTGGTGAGATTGAGAGAATCAAGAGTTTTCCTTCG AGGAATTATTCGTTTGTTGAATTTAGAAGTGTCGATGAAGCTAGACGTGCAAAAGAAGGCCTTCAAGGACGCCTTTTTAATGACCCTCGAATAACAATCT TGTATTCAAGCAGTGATCCGGTACCTGGCAAAGACTATCCTGGTTATTATCCCGGAAATGATGGGCTAAGACCCGATATATTCTTGAACGAGCATGCTTT TCGTCCATTACAAATGGATGTATTTGGTCATACTCCTATGGTTCCTAATAATTTTCCTGGACAGTTACCACCTAGTGGTATTGGATCAACTGCACCAATG CGGCCTTTCGTTCCTCAAGGTAGTCTTGAATCTCGAATTTCTGGCCCCGGCTTTAATGAGGCGAGCTCACTCCACAAATTTCAAGATGGTAGCTCCAAGA GTAAGGTGGGTCCAAACTGGAAAAGACCATCCCCTCCAGCATCAGGGCTACTTCCATCTCCTGCATCAGGTACTAGGCTTCCTGCAAGATCTGCCTCTGG TGCATGGGATGTACTCGACATAAACCATATCTCCAGAGATTCTAAACGTTCAAGGATAGAAGGTCGTGGGTTAGCTATGGAACAAACATATGGGATGGAT CCAGCTCATCTTGGTCCAGTGAGCTCAAGGATTGCAGCCGGAGTACATGGGCCTGCCGAACCTGATAGTGATCATATATGGCGTGGAATTATTGCTAAAG GGGGAACTCCTGTTTGTCATGCTAGATGTGTCCCTATCGGGAAAGGGATAGGGACTGAGCTTCCTGATGTTGTTGATTGCTCAGCGAGGACAGGATTGGA TATACTCACAAAACACTATGCTGATGCAATTGGTTTTGACATTGTTTTCTTTCTGCCCGACAGCGAAGAAGATTTTGCTTCTTACACTGAATTTCTTCGC TACCTTAGTGCAAAAGATCGTGCTGGTGTTGCTAAGTTTGCTGATAACACCACCTTATTCTTGGTACCTCCTTCTGATTTTCTGACAAAAGTTTTGAAAG TCCCAGGGCCTGAACGTCTATATGGTGTGGTTCTGAAGTTTCCTCAAGTGCCAAATAGCACACCAATGCCACAATCATCACATTTGCCTAAACAGTCTAC TCAGTATATGCAGCAGATTCCTCCTTCACCAGCTGAGTATGGTTTGATTCCTGCAAAGGAGGAACAGGTTTTGCCAATGGACTATAACAGACTATTGCTT GAGGATTCTAAGCTTCCCCCTAAACCAGTATATCCAGTTACAAGTGGCCCTCCTTCAGTTCAGCCTATGCGTACCGATTTTGCTCCCAGCAGTAATGCTT CTCTGTCCCAAGCTGGTGTTACATTAACACCGGAGCTTATTGCAACATTAACCAATTTTCTCCCTGCAACTACACCAATATCTGCCACTGATGGTACCAG CTCCGCAGGAGGCTCCTTGACTGTGAAACCTCCATTTCCCCCTGTTGCACACAATGATGGAAACCAATCTCAATTATGGAAACCAGAGCATCCAATTGTT GATCAATCTATTCACCCTCCTCAGCCATTGGGGAATATGTATAACATTCATAATGCTCACTATCAGCCTTATCCAGTGGCACCTACATCTGTCCACCCAG TGGTCTCAAGCAGTTCTCACATCCAAGAGACTGTTTCCAGCTTACAGCAGCAAGGTGCTGTGTCATCTAGACCCATGACTAATTACATGATGCCCTCTCA AAGTGGACAGTTAACTGTATCCCCACATGTCAATCATCAGTACCAAGTTCAACACTCCCCTGGCGCTCAGAAAGGCTTTGTAGGAATGCAAGGAACAGAT ACCTCTGTTTTATACAATTCTCAGGCTTTCCTGGATTCTAATAATTCTTTTACCTCATCTAATCATGTTCAAAGTGCTAATCCTTCACGACAGCAAACTG TCATGCCATATACAGTGGAGCAAGTAAACTCAGACCTTTCCAATCAACAGGCTCCTCTATTTGGAGTTGGTCAGGGCACATCAGAAGTGGAGGCCGATAA GAATCAGAGATACCAGTCGACATTACAGTTTGCAGCGAACCTTCTCCACCAAATACAGCAGCAGCAACAGCAGCAACAACCAACCCAAGGAGGATCTGGG CCAGGAATCCAACAATGAGAATTATTCTTGTAAGTAATCACCCTTTGACTAATTCTTTTGAATGAATATTTTATATGGCATCCCTGCTCCTCATAACCTA GGTTTAATATGGAGATTCTGATCATATTTCTGTTTTTTTCCATCATCTTTTTGTCATAGTTGTAAATATGTTGCATGTGACTTTTTGGTTTTATATGTCA GTTGCAAGTGATATTCATTTAATCTGTGGGTTCTAAGCCAGAAATCCTGAAAACCGTATGGTCTTGTGGTAAATACGTTTGCATTTACATGATGTTTATA TTGTGAAATCAGATTGCAATTTCACTTCAATGCCAATTACGTGATGTTTAGGTTGAGAGCTATAGTTGGTTTTGTAAATTGCATTGTTAAATCATCATGG ATGATAGAGACTAGATATGATTGTCTGTTGGACTTGTAGTTTCTGCTTTCGGGTGATTAATTGTATGATTATTTGATACTTGCGGGTAAATATCTTGGTT TGCATCCTTTTGCTTATAATTAATTGTTCCTAGTTAAAATTTCTCCAATAGTTTCATTTCCTTATCATCTTATTTCTTAGTGGTTTTCTGTCTCTCTGAT ATGTTACTCTGATTCAAAAGTTTAGCTTATTCTGTCGAACTTTTCTCTATTGCACTTTATTTGCAAGTTTAGTATCCCTTTGTTTTTAGCTTTAAGTTTG GATATCTTTTGTCTTTTCTTTTCCCCCTTGGATGTTAGTTGTTAGTGTTGGTAATTTAATCTCACTCTTATTTTGCTGTGAGATGTAATATTGAAATCTG CACTATGTAAAGACCTTGAATGTGCTTCTAAAGATTATGTGAAGAATGATGATACTTGCTGATGAAATTTTGTAAATTTGGAGTTACCACTTTTTGCTAC TTTCCTATCTTAACCATAATTAGGGATTGGTTGACTGAATGAATCTACAAATCTTTACAATTGCTAATCGTGCCG
• Tissue: pods
• Gene name: LI_gene_176408;
• Additional information: details;

Expression of Ll_transcript_490129

FPKM

• PAB: 2
• PNAB: 2.1
• PS1: 2.3
• PS2: 3.2
• PS3: 3.7
• PW1: 2.2
• PW2: 3.7
• PW3: 5.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_490129

• Blastp: Flowering time control protein FPA from Arabidopsis with 43.73% of identity
• Blastx: Flowering time control protein FPA from Arabidopsis with 43.62% of identity
• Eggnog: Rna-binding protein(COG0724)
• Kegg: Link to kegg annotations (AT2G43410)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019413411.1)
• Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (PF00076.21)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;