Ll_transcript_490156

Id TrinityTRINITY_DN50327_c1_g2_i1
Name TranscriptLl_transcript_490156
SequenceCTCTCTCTCTCTCTCTCTCTCTCTTCAAAGCATGAAATGAAATGATGACATAACATCGGTAGAAAGAGAAACAAACAACAAAGAAAAAGAACATCTTCTT TCTTAGAAAGGAGCTTGTCTTCTTGGAATCCTTTCATTCATCGTCGATGTCCATCACCCCCATCTTCCTTTCCCTATTCTCTTCCCTTTCCTTCTAAAAT TTCCCCAAAGAAAAAAGAAGAAAAAAAGGACCAAAAGAGAATTTAGTGGGAAGAAAATTTTGAAAAGGAGGAATACCCAGGTAATTAATTCATCGAAAAA TTCGATTTTGATACCTGGGTGTTTCTCAAAATTTGATTTTTTTCCTTAATTGGTTGAAGGGTTTGGTGATTTGATGGACTTGGACAGCATTGAATGTGTG TCATACTCTGATGGCATGGATGAAGATGAGATCCATCTCCACCATCATCACTCTGAGTTTTCTTCCACAAAGTCTCGTAATGGAAGTACCAATCACAATA TTTCCATGGTTTCCATGGCCATTGCTCCTGCAACCAGTGTCCATGAATTGCTTGAATGCCCTGTTTGTACCAATTCAATGTACCCTCCAATTCATCAGAT TTTAGTTTTTGTTGTTTTTTTCTGAGCATGGGGTTGTGGGATGAGGACACTTTGCTTAATTGGATTTGGTTTCGAAGTTGGATGTTCATTACATAGGGAA AGCATTGTAAGTCACTTAGCAATTGCATGCGTGGGTTTGGCTGGAATAGGTTGCCCTTTAGGGTCCGCTTACGCTTACGAGTTGGGTTTCGGAGATGAAT GAAGGAAAAAAGAAGGTTTCAGAGTCATTTCACAAATATATTTCGTTGTAAATTGGTTGTTGTCTTAATACTCAGTAGATATATCTATGCGTTGAAGGAA GCTTGATTTAAGGATTATTTACACATCCTGCTTTTCAGCATCGAGGAATGTATTTGGTTTTTTTATGTGTTACTTAAATGGAGAGTTTTGATCTCTGTAG TATGTTCACTTGTTTTCATGAGAGCAAGTGCCAAAATCTGGCTAATTTTGTTTGAATACTTAGAAACATGATAAGTGGTTTTCTCTGGTACGGGTATGTG TTATTCCATCAAATCTGGTATGTTAGGGTTGCGCTCGGTTCGCATATTTGATACTCTTTCATACTTATATTACTACTATTAACTATTAATTACAAATAAT TAATAATATATTTTAAAAATTTATTTCAATTTTCTTTAAAATAATTCCATATTTTAAAAATGAACTTTAGTTGTTAAAACACAGGAAAATGAGCAAAATG AACTTAAACAAAAAGAGCAAAAATCAGATTAAAAGGGATATCCAATCCCTTTGCATGTCTAATTAAGAGGCCCTGAAACCCATGGAGGCTAGAAAAGCTA GCCCATCCTGAAAAGGATATGCAGACAAAACTTCTGATTGAAAATTTATTCATTGCTCTCAAACTCAATACACCTAAGACCAGGAAATGGAGCAAAAATG TGCCTTTACAAATTTGACTTCCAGAACCCTTTACCAGACATCTTGTTCCATGATTGATGAACAACCTCTCAATGCAATAGATGACTGCTAGTATCGGAAA TCTGTGCTGCATAAATTCACAAGAGAATATTGACTACATTACTTCAAATTATGCTAGCAATTACAAATATTAATTTCAAAATTTTGCGTCTCTACCTACT AATGAATAAAATACAGGACTTATTTTCTTGACAATATAAATATGATATATTTGTATTGTTCATTGCATGCATAATAAATGTTACATGTTTGCAAGTGTGC ATCTGTTGTACATGCAATTCACTGTATACAAGAAGTGCTTATTTTTTTTGTTACAAGAAGTGCTTATTTTTTTGTTACAATAAGTGCTTATTTTTTGTTT ACAAGAAGTGCTTATTTTTTTTGTTACAAGAAGTGCTTTTAAAGCTACCTTTCTTCTGCTACCCTAAGTTAAGCTGAAGAGATCCTTGAAATTAAACAAC TGCGACACCATATGGTCTCTACTCTCTAAAGCTGAGAACATCTTTCAATTTGTGGGATACAACTTGTATTGAGAAATGAATTAGTTAAAGCTTACTAGTA GATTTGCTGAGGTCTATGTTCCGATTTCTTGATCTTTCTGCTGCCCAATATTTGTGTGTGTGTATGTCGAATGCTATAGCCTAATTATTTTTTCTCAATC TTTAGCTAATCTTTGGTTCTGCAAATCTCGTGTCACCTGTGCAAGACTATATCTTGTCACGATTGAAGCTTAAAAAATGTCTATGTTTGCCAAAAAGGAA GGGAGTATGTTGTATATAACGATTAGCTTCTTTGCAGTGCCACAATGGCCACACACTGTGTTCCACTTGTAAAACAAGGGTGCACAACCGATGTCCCACT TGTAGACAAGAGCTTGGAGATATTAGGTGTTTGGCACTGGAGAAAGTAGCTGAGTCACTTGAGTTACCTTGCAAGTTCTACTCCCTTGGATGTCCGGAAA TCTTTCCATACTACAGCAAGCTTAAGCATGAGACAGTATGCAATTTTAGGCCGTACAGTTGTCCTTATGCCGGATCTGACTGTTCTGTTGTTGGGGACAT TCCCTTCCTTGTTGCACATTTGAGGGATGATCATAAGGTGGATATGCACACAGGATGCACATTCAACCATCGTTATGTGAAGTCGAATCCCCGTGAAGTA GAGAATGCAACCTGGATGCTCACGGTGTTTCATTGTTTTGGCCAATACTTCTGCCTGCATTTTGAAGCTTTCCAGCTTGGCATGGCCCCTGTTTACATGG CATTCCTCCGTTTCATGGGCGATGAGAATGAGGCTCGGAACTATAGCTATAGCCTAGAGGTTGGGGGCAATGGCAGGAAACTCATGTGGGAGGGTATGCC ACGAAGTGTTCGGGATAGTCACCGTAAAGTCAGGGATAGTCATGACGGTCTCATTATTCAACGAAATATGGCACTATTTTTCTCTGGTGGGGATAAGAAG GAGCTGAAACTCAGAGTTACAGGAAGAATATGGAAAGGACAACAGAATTCAGATGTTAGGGTGTGCATACCAAATCTTTGTAGCTGAGATGTTCTTTGAA GGACATTTTTATCCTTTGTGTTTGTGACACTCTTGTGAGCTGTATCTGGGCCAACTTTATGCATGTTGTAATAGATTAATGCACTAAGTTGGCTTTGAAA TTTTCAGTTTTCTTAAAGCGTGTGATAAACAAGATTTTCTTTCTTCCTTTATAAATTTGTTTGATCAGAATTTGACACTGGAAACTCGGATTCGTCTTTC TTGGTCTGAACTGTGTTATGTTTGCTTCTTCCACTTGCTATGAATTGTTCAATTACATTGCTTTATAATTCAAATTGTATCAGTTAGAATATCGAAAGAA CTACGGTTCATGTATCCTGTATGCTTTACTTGTAGTTATGCCTGTGGCACTTCTAATATAGGCTGTTTTAAGATTTGTGTTGAAA BLAST
Tissuepods
Gene nameLI_gene_176417; 
Additional informationdetails; 

Expression of Ll_transcript_490156

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_490156
BlastpE3 ubiquitin-protein ligase SINAT5 from Arabidopsis with 89.8% of identity
BlastxE3 ubiquitin-protein ligase SINAT3 from Arabidopsis with 92% of identity
Eggnog-
KeggLink to kegg annotations (AT5G53360)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_016162498.1)
PfamSeven in absentia protein family (PF03145.15)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;