| Id Trinity | TRINITY_DN50329_c0_g2_i3 |
|---|---|
| Name Transcript | Ll_transcript_488656 |
| Sequence | GTCATGTCCTATCATACCCACGTGCCAGTGTACATTCCAAGATACACCTTTAGCTGGCTGGTGAAACCCATGTGGTGGGTCATAAGTATGCACATCATCT TGCCTTTCTTTTTATTTCTCCCGATTTTGACCCAAATATTTGTGAGCGTAACATAAACTTTGCTGCTTTTTATAGAATTTCTCCACACAGCAGCTGATCT GACTTTGGTGCCATCAGCTGCCATTGGACGGGAACTCCAAGCTTATAAAGTAACAGCAGCTAACAGGATTCGTCTTTGGAATAAGGGTGTTGATTCTGAT AGTTTCCATCCTCGGTACCGCTCGGATGAAATGCGATTAAGACTAAGCAATGGTGAACCCGAGAAACCCTTGATAGTTCATGTTGGACGGCTTGGATTTG AGAAGAGTTTAGATTTTATCAAAAGGTAGTAAACTTCGTATTGAAATTTTCCTAACCTGGAGTCATAATTATATTCAATATTTTCCAGCTGATCTTAACA ATCCAGAATATAATCCGGAAGAGTGGTAAAAACTGAATCATCGGTTATTGATGTACTGATCCTGAAAGAATGTTAAAACCGTTTCAAAATATGCTTTCTA GCAATTCACTTTGGCAAGCCCTTAGCTTTCTCTGTTTCTTATTGCCATGCCATATAATAGATCTCGAGCGGGAAATCGATTATCTGTAGCCCACCTTTAA CACACGAACTACATGATTTCGCAGGATCATGGATAGCCTTCCTGATGTGCGAATTGCTTTTATTGGAGATGGCCCATACAGGTGACTTACTCTAACATGT ATTTCAAGTATCATCTCTTGCATTTTTTGTTTTTGAAATTGGCATAGCCCGATTTAGTCGTCCCACGTGTCACGATCTTGTTTGTAGATGACATCCCTTC ATCGTTAGATAAAGAAATGTAAAATATAAAATCTGTTGTCCCTTTTCTGTAATGCGTGTTCCTAACTGCCAGGGAGGAGCTGGAGAAAATGTTTGAAGGT ATGCCTGCAGTGTTCACCGGAATGTTAGGAGGGGAAGAACTCTCTCAAGCATATGCCAGTGGAGATGTTTTTGTCATGCCTTCAGAGTCAGAAACGCTTG GCCTCGTTGTTTTGGAGGCGATGTCCTCAGGGATTCCCGTGGTAGGAGCACGTGCCGGAGGAATTCCAGATATAATCCCTGCAGAACAGGAGGGCAAAAC TGGCTATCTATATAATCCGGGCGACCTTGACGACTGCTTAAGCAAATTAAAGCCTCTGTTGTTCGATAAAGAATTCAGAGAACACATGGGAAAAGCCGCA CGTAAAGAGATGGAAAAGTACGATTGGAAGGCAGCCACTCACAACATTCGCAACGAACAATACAACGCTGCGATTTGGTTCTGGCGAAAGAAAAGAGCTC AACTATTGAGACCCTTTCAATGGTTGACAAAACGGATTTTCGCATCACCAGCAGTCAACTATAGGTGATGCAGATACATCTTCTAAGCTTAGTTTGGTTT GGATTCATAGAAGCTATGTATTGGAATACATTGAGTGACATTCATTTTCTGTATATATATGATGGAGCATACAATATGGTCACTTTGGCTTCATATCAAA ATTTTAAATGTGTAATTCATTAGTGTAATGTATTAATTAGACTTTATCTTGTTTATAAGAAATGTTTCCTAAAAAATTATGGATACAACAAGGTTCAAAC CTCCATTCATTAAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_176430; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_488656
| Blastp | Sulfoquinovosyl transferase SQD2 from Arabidopsis with 73.89% of identity |
|---|---|
| Blastx | Sulfoquinovosyl transferase SQD2 from Arabidopsis with 73.62% of identity |
| Eggnog | Glycosyl transferase (Group 1(COG0438) |
| Kegg | Link to kegg annotations (AT5G01220) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019450306.1) |
| Pfam | Glycosyl transferases group 1 (PF13692.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |