Ll_transcript_489572

• Id Trinity: TRINITY_DN50330_c3_g4_i2
• Name Transcript: Ll_transcript_489572
• Sequence: ATTAATATGGCCTTATAATATTCAAGCACCGTCCCATATTGAACTCTTCTTTGTCCATACTTGTGACTAACCCATTAAATCTTCATTCTTTCTATGCATG TGAATCATTTTCTCAATGTGAAACCAAACTCAAAATTTTCAAACTTTGAAGGCACGCTAATATATTCAAACTCCACCTTTTCCCCTCACTTTCCTAACTA CTGCTACATACACTGACATAACACCAACCACAACAACAACCAAACCTTCACCGCCAGCATGTTCGCCGGCCGAATTTTGGGGCCGCCGGACACTTTGCTC ACTGTTTTGTTTTTCCTCTGCCTTGTTACTTCATGTCATTCAAATGAGGTTCAATCACTTATGAAGTTTAAGTCCTTTATCCAAAGTTCAAATGGCAATG TTTTCAGTTCTTGGATACAAGCAAATTCTCCATGCAACTTCACCGGAATTGTTTGCAACACCAATGGTTTTGTCTCAGAAATCAACCTTGCACAGAAACA GCTAGCAGGCACTCTTCCTTTTGATTCAATTTGTGCGCTTCAATCGCTTGAAAAAATCTCTGTGGAGTCCAATTTCTTGCAGGGTAGCATAAGTGAGGAG TTGAGGAATTGCAAAAACTTGAAGTACTTGGATTTGGCTGGGAATTCATTTACAGGAATAGTGCCTGATTTGTCAAGTTTGAACAAGTTGGAGTACTTGA ACTTAAATGCAAGTGGAATCTCTGGAGCATTTCCATGGAAATCATTGGAAAATCTAACAAGTCTCACTTTCTTGAGCCTTGGTGATAACTTGTTTGAAAA AACTCCTTTCCCTTTAGAGATCTTAAAGTTTGAAAAGTTGTATTGGCTTTACTTATCAAATTGCAGCATCACTGGGAATATTCCATTGGGTATTGGAAAC CTTACTCAGCTTCAAAATCTTGAGCTTTCTGATAATTATCTGTATGGTGAGATTCCTGCTGATATTGGAAAACTTCACAAGCTATGGCAACTTGAGCTTT ATGACAATAATTTGAGTGGGAAAATTCCAATTGGATTTGGCAACCTTACCAATCTAGTCAATTTTGATGCTTCTAACAATGATCTTGAAGGTGATCTTTC TGAGTTAAGGTCCTTGACAAACCTTGCATCACTGCAGCTTTTTCAGAATCATCTCTCAGGAGCAATTCCACAAGAGCTTGGAGATTTCAAAAACCTTACT GAAATCTCTCTTTATGATAACAAGTTCACAGGTTCTCTTCCACAAAACCTTGGCACTTGGAAAGGCTTGGACTACATAGATATTTCAGATAATTCATTTT CTGGTCATATACCACCTGACATGTGCAAGAACAACAGAATAGATGAGCTAGCATTGTTGAACAACAGCTTCACGGGAAGTATACCGGAAACATATGCAAA TTGCACATCTTTGAAACGTTTTCGCCTTAGTCAGAATTCACTTTCAGGTGTCGTTCCTTCGGGTATATGGAGCTTGCCAAATCTGGAGCTTATAGATTTC TCAATGAACAAGTTTGAAGGTCCAATAACATCTGATATTGGTAGAGCAAAATCTCTTGCTCAACTGTTTTTATCTCACAATCAGTTCTCGGGTGAGTTAC CTTTGGAAATCTCAGAAGCTTCTTCATTGGTATCTATTCACTTAAGTTCAAATCAAATTTCTGGTCACATACCAGAAATGATTGGAAAAATGAAGAAACT AACTAGTCTTGATTTGCATAATAACAACCTTTCTGGTATTATACCATACTCTATTAGTTCTTGTATTTCTCTTTATGAAATAAACCTTGCTGGTAACTCT CTACATGGAGAAATACCACCAAGTATTGGGTCTCTACGTACCCTCAACTCATTGAACTTATCCTCCAATAAACTTTCTGGTGAAGTTCCACCAAGTTTAT CGCCTCATTCGCTCAGCCTTCTTGATTTGTCAAACAACAATTTGGTTGGTCAAATACCAGAACCACTTGATATTTCAGCTTTCACAGATGGATTCATGGG AAATCCTGGTTTATGCAGTCAGAGTTTGAAGAATTTCCGGCCATGTTCAATGGTATCAGGAAGGTCCAATACACACAGAACTCTTCTGCTCTGTTTGATG GCTGGTTTAATGCTTATGCTTGTTTCTTCAGCATATTTCCTCTTCATGAAACTGGACAGCAACAAGTTTGAGAAGCCACTCAAGACTACTTCTTGGGATG TCAAGCAATACCACAAGCTAAACTTCGACGAGAATGAAGTTATCCAAGGGATCAAGGCTGAGAATTTGATCGGCAGCGGAGGATCAGGGAATGTTTACAA GATCACACTTAAAAATGGTGTGGAATTCGCAGTGAAACACATATGGACTTCAAATCAAAGTGACCGTGAAAGTTGCAGGAGCAGTTCAGCTATGCTGAAA AGGAGTTCAAAGTCACCTGAGTTTGATGCAGAAGTGGCTACTCTCAGTTCCATAAGGCATGTGAATGTGGTGAAGCTCTATTGTAGCATCACAAGTGAAG ATAGTAACCTTCTTGTTTATGAGTTGTTACCAAATGGAAGTTTGTGGGACAGGTTGCACACTTGTAGTAAGAAGACAAAGATGGGGTGGGAGGTTAGGTA TGACATAGCACTTGGAGCTGCTAGAGGATTGGAGTACCTGCACCATGGGTATGATAGACCAGTTATACACAGGGATGTCAAGTCTAGTAATATATTGCTT GATGAGGAATGGAGGCCAAGGATTGCTGATTTTGGACTTGCCAAGATTGTGCAAGGTGGTGCAGGCAATTGGACCAATGTCATTGCAGGAACACTTGGAT ACATGGCTCCTGAGTATGCCTACACTGTTAAGGTGACCGAGAAGAGTGATGTTTACAGCTTCGGAGTGGTCCTAATGGAGTTGGTAACAGGGAAGAGGCC TATTGAAGAAGAGTTCAGCGAAAACAAGGACATTGTGTATTGGGTATGCAACAATATGTGGATAAACAAAGCAAATGATATTGTTGAATTGGTTGATTCA ACCATTGCAAAACATTTCAAAGAAGATGCAATGAAGGTTTTGAGAATAGCAACATTATGCACTGCCAAAATCCCATCTTCAAGACCATCAATGAGAATGG TAGTTCAAATGCTGGAAGAGGCAGTGCCTTGTACTCTACCCAACATGATTGTGACTATAAATGATTGAAGTTTTCTATCTAATCTGAACATTTTCCCTCT TTGCCAAGTATCACAGGAAGTGAGGCTAGAAATTGAGGCTGCAAAGGGGTGATAAATAGTATTGGCTTCATTTCCTACAGAACTGTTTGTACCAAGAAAA TAATGCATATAGTTCCAAGTTTAAACTATGTGCTATTGAGAAACCAAAAGAGGATTAGCTTGTAGCTTTATACAATGAATAATCTAGAACTCCTTCAACT ACTCTCCTAATTACTACATAAGGAAACTATGCAATGTTTTTTATGTATGATGCACTTACTTTTTCGGTTACTACTTATATGAGTATCTGTTAAGAAAGAA GTGAGAATTCTAGGAATTGCAAGAATTCGAAGAAGGAATTGAAGATGAACAGGGATTCTTATGATTGAAAAGAATCCGAGAATTTCAGTTTATTGAAGAA GAAGAGAAGAATTACAATGAAATAAGAAGTTCCTTGAAAATGAATGAATTACAAGTTAGTTG
• Tissue: pods
• Gene name: LI_gene_176441;
• Additional information: details;

Expression of Ll_transcript_489572

FPKM

• PAB: 3.2
• PNAB: 3
• PS1: 2.8
• PS2: 1.9
• PS3: 2
• PW1: 27
• PW2: 21
• PW3: 11.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_489572

• Blastp: Receptor-like protein kinase HAIKU2 from Arabidopsis with 55.12% of identity
• Blastx: Receptor-like protein kinase HAIKU2 from Arabidopsis with 55.3% of identity
• Eggnog: leucine Rich Repeat(COG4886)
• Kegg: Link to kegg annotations (AT3G19700)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019426454.1)
• Pfam: Leucine rich repeat N-terminal domain (PF08263.11)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;