Ll_transcript_491160

• Id Trinity: TRINITY_DN50333_c0_g1_i5
• Name Transcript: Ll_transcript_491160
• Sequence: GCTGAAACAAAACCCTCTCTTCTTCTTCTTCTTCTTCCTCTTCTTCCTCCTTCTCCATAACCCTAACGCGGTTACTCGCAACTTTCACAATACTGCACTT GCTTCATTTCACAACATTCACTCGATCGTCGTAATAATTCAGCAATGGAGGAGAGTGTTATGATCCAAACGGAAACACAGATCAATTCATCGGATCCTTC TTCTTCTTCATCTATTTCCGTTTTACTTCACCGCAAAATTGAGTTCCTTCCCGCCAAAAAACCTTTTAAGGGCTTTTCCAATGATTTTCATATCGAGACG CTAAATCCTACTACTACCTCTGAAGCTACTCTTACACTCTCTGCTTCTGCTAAAAGGAACGATGTTTCTGAGTTTTCTGAATTTGGCTTGGATCCTGATC TCAGCTTTGGTATTACCGTTCGGAAAATTGGAGCTGGATTGCGAAATCTTGGAAATACTTGTTTTCTCAACTCAGTAATACAGTGTTTGACATATACAGA GCCTCTAGCTGCATATTTGCAAAGTGGCAAGCATAAAACTTCATGCCGCGTTGCTGGATTTTGTGCTCTGTGTGCAATACAGAATCACGTGAGCCGTGCA CTGCAATCAACTGGGAGAATTTTATCCCCAGAGCATCTGGTTGGGAATCTGCGGTGTATCCTTGCGTTTTGATGCATGACTAAGTTATTAGTATTTATTT GTTTTTATTTCTTTATACTTATTTTAGTTTCATGATGATTTAAACCTTTGATAATTGTTAGTTCCCTTCCTAGACCATTCTATTATTTTCCTATCTTTCT ACGCTTTATGCATCATTCCTCTGGGTTGACACATCTACTCAAATACCTTAGGAGTGGAAAATACCAGCATTTCACGAAATTTCCGAAATGCGAGGCAGGA GGATGCTCATGAGTATATGGTGAACTTACTCGAGTCTATGCATAAATGTTGCCTGCCTTCTGGAATACCAAGTGAATCGAATGGTGCTTATGAGAAAAGT TTGGTTCATAAGATTTTTGGTGGCCGTCTCCGCAGTCAGGTGAAATGCCAGCAATGTAATTATTCCTCCAACAAGTTTGATCCATTCTTAGATTTAAGCC TTGAAATATTCAAGGCTGATTCATTGCAAAAAGCACTTGCAAATTTCACTGCCGCAGAGTTGTTGGATGGAGGGGAGAGGCAATACCAGTGTCAAAAATG CAAGCAGAAAGTTAGGGCTCTCAAACAGCTTACAATTCATAAGGCACCTTATGTGCTCATGATTCATCTAAAGCGGTTCTTTGCACACGATCCTGGACTA AAGATTAAAAAGAAGGTTCATTTTGGATGCACATTAGACTTGAAGCCATATGTCAGTGGGTCATATGATGGAGATGTGAAGTACTCACTCTACGGGGTTC TGGTTCATTCTGGTTCTAGTACTCATTCTGGCCACTATTACTGCTATGTGCGCACTTCAAATAACATGTGGTATACCTTGGATGACAATCGGGTAAGTCA TGTCAGTGAGCGGGAAGTTCTGAATCAGCAAGCATACATGTTGTTTTATGTACGTGATAGAAAAGGTACTGTTCCAAGGAAGCCTATTGACATTGCAAAG CAAGAGAATATGAAGTTGAATGTGAATGCAAATAGAGATTCTTCAACTTCAAACCAAGTATTGAAGGAAGTTACAAATGGTCCAAGGGAAAATAAATCTT GTGAATCATGTTTGATTACTGAGCCTAAAAATATGTCACATGCTGGATCAAGCAGGGTTCCCTTTATGAAGAATGCTATAGTTCAGCAAAAAAATAACCT CATATTACCAGAAAGCTTGGTGCAAAGTGAAAAACTTGTATCTGGACTGTCGTCCCAGCTACAGCCACAGAAGGGCTCACAAGAAGGGTCCCCTCTTTCC ACAGTGCCGGCCAATAATCCCCAGACCTCCACAGATAAACAGATTACTGATGGAGCATCTCAACCTCAGAAGAATGATTTTGTCACCAAAGCTGATATGG CTGCACCTCAAGCATTGAAGCACAAATATGTCAGATGACAGTGGCCTTGTGACTTCACTAATCAACAAAACAACATCGTCGTTCAATTTTTTACACTATC CCAATCGTGTGCTGAGCTTACCTTTGTTTTAAGCCTAACTGTTTTGACTTATTGGCTTTACCTTTTTATTTTTAGGTTGGAGCTTCTGCAACTGGTTCAG CATGTGATGAAGCAGGTAGTAAGGTGTGTGATAGTGCTGTTGGTTGCCAAACACTGGTTCTTCACAAGTCTAATCTTAGTGAAAAGCACCTGAAAAAATC AAGAAAGAAGTTTATGAAGTATAATGTCTCAAGCATATACTTCCGCTCAACTTACCTTTTCCTGGCATACTTGGGTTCACGAAAGAAGAATCACAAAAGA AGTAAACACCAGTGGCTGGGTGTGAAGAATCCAAATAAAGAGAAGCTGGATAAACATGCTCTCTCATCAGATGGACCATGTACATCTGGAAAAGCTGCTA TATTCCCCTCCGCGTCATGTTTTGATAGTAGGACAACCAAGGCTGGTGATAGACCTGATGCTAAACTTAAATTGAATGACAAATCTCTCATAGAAAATAC CGCTGAAGAAGGATTTAGGAAGAGAATTGATATGAACTGTACTGTGCTTGCAACAGCTATGCAAGTAGAAAATATATCTGGGCGTGGTTCAGGAGTAAAC CAATTTGAAACTAGACAATCTGATAGTCTCAAAGATGGTAAAAGAGACCAAATGCATAATAATTTAACGAGTATGATTACCCGAGGTCTGGAAGAGACAG TTGTTGCAAGTTGGGATGATATAGAATTGCCTCAACGTCATTTCTTAGAGTCTAGCAATGACAAGATTGCCAGCATTGGATATGTGGGGGATGAATGGGA TGAGGATTATGACAAGGGGAAGAGGAAGAAGTTGAGGGGCGACAAGGAAAGCTTCGGTGGGCCAAATCGTTTCCAAGAAATTGCTACCGAGAAATGTAGG TCTAAAAGGGCTAAGTTGGACCGATCTAACTCAGGGAACACTCCTTTTAGGATATGAAGTCCAAATCTTTGTTCCCTTCAAAGTCTGGGGGCTTCTTGAA GCATCATCTATTTGGCCTCAGAGTACCTACATTATTCCTTTTTGCTGTATAAAATTTTGTTTGCAGGATTAAATTATTGTCTTTAGGGGCAGAGCAGCAG AGGGTTGGGTTTCTATGTATGTGTTCCTGTAGTAGTAAGCTGCATGTCATAGCCTATAAATTTTGTTCCTCATATTTATAAATATTCGGTACATAATGTT GCAAAACGTCTCTATCTTTGTTGTACTGGAGTTGGATTACGTATTTGGTGTGTTAGGTTAGCCATGAAAAAAGATTCTTAAGAATAATGTGTATAATTTG TTC
• Tissue: pods
• Gene name: LI_gene_176460;
• Additional information: details;

Expression of Ll_transcript_491160

FPKM

• PAB: 0.1
• PNAB: 0.1
• PS1: 0.8
• PS2: 0.1
• PS3: 0.2
• PW1: 0
• PW2: 0.5
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_491160

• Blastp: Ubiquitin carboxyl-terminal hydrolase 23 from Arabidopsis with 60.95% of identity
• Blastx: Ubiquitin carboxyl-terminal hydrolase 23 from Arabidopsis with 62.76% of identity
• Eggnog: ubiquitin carboxyl-terminal hydrolase(ENOG410XQ92)
• Kegg: Link to kegg annotations (AT5G57990)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019441462.1)
• Pfam: Ubiquitin carboxyl-terminal hydrolase (PF13423.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;