Id Trinity | TRINITY_DN50334_c0_g3_i10 |
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Name Transcript | Ll_transcript_489765 |
Sequence | CCATATCATATTAATATGCATCAGTAGTATAGTCCAAAGCATCAAAGTCCTTTCTTCAATGGCCAAAAAAGAAGAGTATCTCCCTCTGTATGAAAAAGTT TGTCTAAAGAGAACATATAATAGAGTACTAGACTCCTTCATCTTACTCCTCCTCTTCTTGCTTCTATGTTATCGCCTTATCTCTATCAAAAACACATTTA CTATTCCATATTTCCTTGCTTTCTTATCTGAGTCTTGGTTCACTTTCACTTGGATTGTTATTCTCAACACTAAATGGAATGCTTCAGCTACTAAAACCCA CCTACAACTTCTCCTACAAAGGGTACCGGATCTTCCAGCAGTGGACTTGTTTGTGACAACAGCAGACCCTATACTTGAACCTCCAATAATCACAGTGAAT ACTGTGTTGTCTCTATTGGCACTTGATTATCCAGCTAACAAGCTAGCTTGCTATGTTTCTGATGATGGTTGTTCCCCTCTTAACTTTTATGCTCTTTTTG AAGCCTCTAAGTTTGCTATGCTTTGGGTACCTTTTTGTAAGAAGTACAATGTGCAACTCAGAGCACCCTTTAGATACTTTTCTGAACCTGCCAATACAAT AAGTGAAGGAGACTCACTACAATTCAAGCAACAATGGCTACAGATGAAGGATTTGTATGACAACCTTAGCAGAAAAATTGAAGATGTAACCAGAGAGCCA ATTCTACTCCCACATGATGGAGAATTTACAGTTTTCTCTAACACACATCCAAGAAATCATCCAAGCATAATCAAGGTTATATTGGAGAACAAAGAAAGTG TTTGTGATGAGGTGCCTCACTTAATTTACATATCCAGAGAGAAGAGGCCAAATCATCCACATCAATATAAAGCTGGAGCTATGAATGTTTTGACAAGAGT TTCTGGATTGATGAGCAATGCACCCTTTATGTTAAATGTTGACTGTGACATGATTGTGAACAATCCTAAGATTGTTCAACATGCAATGTGCATTTTGATG GATCCTAAGAAAGGGAAAGAGGTTGCTTTTGTTCAATGTTTCCAACAATTCTTTGATGGAATAAAAGATGACCCATTTGGAAATCAATGGGTATCTGCAT TTGAGTACATAATAAGGGGCATGGCAGGACTTCAAGGACCTTTCTATGCAGGAACAAACACCTTCCATAGAAGAAATGCCATTTATGGTCTTCACCCTGA TGAAATGGAAAATGAGAGAAAAGGAAAGATATCAATGCAACAATTTGGAAGTTCAAAGGAATTTTTCAAATCAGCAACTGGTGCTTTGGAAGGGAGTGCA TATTCTTCTAAACAGATTAGTCCTTCCAACTTCATTGAGGAAGCAATACAAGTAGCTGATTGTGCATATGAAAATGACACTAGTTGGGGTAAACAGTTGG GTTGGGTATATGGATCAATATCAGAGGATGTACCTAGTGGATTGAATATGCAAAGAAAAGGTTGGAGATCAGAAGGTTGCACTCCAGATCCAATTCCATT TACAGGATGTGCACCTGGAAGTTTAATCCCTACAATGATACAACAAAAGAGATGGACCTCAGGCCTTACTGTTGTATTTTTTAGTAAGCATTCTCCTGTT ATGTGTTCTCTTTTCGGTAAGGTCCAATTCAGGTCTGGTTTGTCCTATTGTTGGCTAACCAATTGGGGTTTGCGCTCTGTCTTTGAAGTAATCTATGCCG TTCTCCCTGTCTATTGCATAATTACCAACACCAATTTCTTGCCTAAGGTAACCATTCAATTTTAGTGCCAAGTTATGTTCTTTCCACTTATCAAATTTCA CACCTTTTGTTATCCTATTTAGTTAACAATATCTTAGCAACTAAGGTCTTGTTTGGTAGCTGAGATGGTTTTGAGTATATTTCTTAAAATGTGGCACATG AGAGTGTGGTGTATGAGTAAATTTCATTCACATATTTGGTTATGATATTCAGTTGAAAATTTCTTAGTAGTTATTGATTTTCGAAAAATATCCATGGCCT GAAAATAAAAGGATTGAAAGAGTCAAAGAGTACATATTTGGTTATATAGGATTCATGAAATGAGAGGTTAATATAGTTTTATTGTAGGGACTTGGCCTAT GGATTCATGTTGCTGTTGCTGTGATTTATTACATTCATACTCTAATAGAGTACCTTGCAATTGGGTTGTCAGTCCAACATTGGTGGAACAACCAAAGAAT GAGCATAATAAGAACAGGAACAGCATCACTTATTGGTTTTTTGAGTGCCATGCTTAAGCTCTCAGGAATATCTGACACAGTCTTTGAAATAACACAAAAG GAAGAACCAACTTCTAGTTCTAATGATGAGGTTGATCCTGGTAGGTTCACCTTTGATAAGTCACCAGTTTTTGTGGTAGGCACCATCATTTTGATGTTGC AATTGACAGCTTTGTTTATCAACTTTATGGGGCTGCAACCACCACCAGCATCAGGTAATAGTGGAAATGGTTCTGGGCTAGGGGAATTGATTTGTAGTAC ATATTTGGTACTGTGTTATTGGCCTTTTTTGAAAGGGCTATTTGCCACAGGAAAATATGGGATTCCCTTGTCTTCTATTTTCATGTCAGCAGGGACTGTA TTTTTTTTTCTGGTTTGTGTCAACCTTTAGTACTTATTATCAATTATCAATTTAGTTACTGAATGAATAAAATGTACACGGAGAAGTTAGCCCCACATAC CTATGGATGTTGTCGGCTCGGACATGATTGTCAGATATAAAGTGTTGAA BLAST |
Tissue | pods |
Gene name | LI_gene_176464; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_489765
Blastp | Cellulose synthase-like protein B3 from Arabidopsis with 45.88% of identity |
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Blastx | Cellulose synthase-like protein B3 from Arabidopsis with 45.88% of identity |
Eggnog | Glycosyl transferase, family 2(COG1215) |
Kegg | Link to kegg annotations (AT2G32530) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019447721.1) |
Pfam | Cellulose synthase (PF03552.13) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |