| Id Trinity | TRINITY_DN50334_c0_g3_i12 |
|---|---|
| Name Transcript | Ll_transcript_489767 |
| Sequence | CCATATCATATTAATATGCATCAGTAGTATAGTCCAAAGCATCAAAGTCCTTTCTTCAATGGCCAAAAAAGAAGAGTATCTCCCTCTGTATGAAAAAGTT TGTCTAAAGAGAACATATAATAGAGTACTAGACTCCTTCATCTTACTCCTCCTCTTCTTGCTTCTATGTTATCGCCTTATCTCTATCAAAAACACATTTA CTATTCCATATTTCCTTGCTTTCTTATCTGAGTCTTGGTTCACTTTCACTTGGATTGTTATTCTCAACACTAAATGGAATGCTTCAGCTACTAAAACCCA CCTACAACTTCTCCTACAAAGGGTACCGGATCTTCCAGCAGTGGACTTGTTTGTGACAACAGCAGACCCTATACTTGAACCTCCAATAATCACAGTGAAT ACTGTGTTGTCTCTATTGGCACTTGATTATCCAGCTAACAAGCTAGCTTGCTATGTTTCTGATGATGGTTGTTCCCCTCTTAACTTTTATGCTCTTTTTG AAGCCTCTAAGTTTGCTATGCTTTGGGTACCTTTTTGTAAGAAGTACAATGTGCAACTCAGAGCACCCTTTAGATACTTTTCTGAACCTGCCAATACAAT AAGTGAAGGAGACTCACTACAATTCAAGCAACAATGGCTACAGATGAAGGATTTGTATGACAACCTTAGCAGAAAAATTGAAGATGTAACCAGAGAGCCA ATTCTACTCCCACATGATGGAGAATTTACAGTTTTCTCTAACACACATCCAAGAAATCATCCAAGCATAATCAAGGTTATATTGGAGAACAAAGAAAGTG TTTGTGATGAGGTGCCTCACTTAATTTACATATCCAGAGAGAAGAGGCCAAATCATCCACATCAATATAAAGCTGGAGCTATGAATGTTTTGACAAGAGT TTCTGGATTGATGAGCAATGCACCCTTTATGTTAAATGTTGACTGTGACATGATTGTGAACAATCCTAAGATTGTTCAACATGCAATGTGCATTTTGATG GATCCTAAGAAAGGGAAAGAGGTTGCTTTTGTTCAATGTTTCCAACAATTCTTTGATGGAATAAAAGATGACCCATTTGGAAATCAATGGGTATCTGCAT TTGAGTACATAATAAGGGGCATGGCAGGACTTCAAGGACCTTTCTATGCAGGAACAAACACCTTCCATAGAAGAAATGCCATTTATGGTCTTCACCCTGA TGAAATGGAAAATGAGAGAAAAGGTCTTACCCTCTCAAATGATATACAATATTTACTTATCAATATATCTTCATTATTCCAATGGACACCCAAATAAAGG AAAAGGGTAAAAACCAACATGTCAGAGGCCTTAAAATATGCTTAAGAGGCCTTAATTATTTTGTATATTTAGCAGGAAAGATATCAATGCAACAATTTGG AAGTTCAAAGGAATTTTTCAAATCAGCAACTGGTGCTTTGGAAGGGAGTGCATATTCTTCTAAACAGATTAGTCCTTCCAACTTCATTGAGGAAGCAATA CAAGTAGCTGATTGTGCATATGAAAATGACACTAGTTGGGGTAAACAGTTGGGTTGGGTATATGGATCAATATCAGAGGATGTACCTAGTGGATTGAATA TGCAAAGAAAAGGTTGGAGATCAGAAGGTTGCACTCCAGATCCAATTCCATTTACAGGATGTGCACCTGGAAGTTTAATCCCTACAATGATACAACAAAA GAGATGGACCTCAGGCCTTACTGTTGTATTTTTTAGTAAGCATTCTCCTGTTATGTGTTCTCTTTTCGGTAAGGTCCAATTCAGGTCTGGTTTGTCCTAT TGTTGGCTAACCAATTGGGGTTTGCGCTCTGTCTTTGAAGTAATCTATGCCGTTCTCCCTGTCTATTGCATAATTACCAACACCAATTTCTTGCCTAAGG TAACCATTCAATTTTAGTGCCAAGTTATGTTCTTTCCACTTATCAAATTTCACACCTTTTGTTATCCTATTTAGTTAACAATATCTTAGCAACTAAGGTC TTGTTTGGTAGCTGAGATGGTTTTGAGTATATTTCTTAAAATGTGGCACATGAGAGTGTGGTGTATGAGTAAATTTCATTCACATATTTGGTTATGATAT TCAGTTGAAAATTTCTTAGTAGTTATTGATTTTCGAAAAATATCCATGGCCTGAAAATAAAAGGATTGAAAGAGTCAAAGAGTACATATTTGGTTATATA GGATTCATGAAATGAGAGGTTAATATAGTTTTATTGTAGGGACTTGGCCTATGGATTCATGTTGCTGTTGCTGTGATTTATTACATTCATACTCTAATAG AGTACCTTGCAATTGGGTTGTCAGTCCAACATTGGTGGAACAACCAAAGAATGAGCATAATAAGAACAGGAACAGCATCACTTATTGGTTTTTTGAGTGC CATGCTTAAGCTCTCAGGAATATCTGACACAGTCTTTGAAATAACACAAAAGGAAGAACCAACTTCTAGTTCTAATGATGAGGTTGATCCTGGTAGGTTC ACCTTTGATAAGTCACCAGTTTTTGTGGTAGGCACCATCATTTTGATGTTGCAATTGACAGCTTTGTTTATCAACTTTATGGGGCTGCAACCACCACCAG CATCAGGTAATAGTGGAAATGGTTCTGGGCTAGGGGAATTGATTTGTAGTACATATTTGGTACTGTGTTATTGGCCTTTTTTGAAAGGGCTATTTGCCAC AGGAAAATATGGGATTCCCTTGTCTTCTATTTTCATGTCAGCAGGGACTGTATTTTTTTTTCTGGTTTGTGTCAACCTTTAGTACTTATTATCAATTATC AATTTAGTTACTGAATGAATAAAATGTACACGGAGAAGTTAGCCCCACATACCTATGGATGTTGTCGGCTCGGACATGATTGTCAGATATAAAGTGTTGA A BLAST |
| Tissue | pods |
| Gene name | LI_gene_176464; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_489767
| Blastp | Cellulose synthase-like protein B6 from Arabidopsis with 53.14% of identity |
|---|---|
| Blastx | Cellulose synthase-like protein B6 from Arabidopsis with 53.14% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (AT4G15320) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019447721.1) |
| Pfam | Cellulose synthase (PF03552.13) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |