Ll_transcript_489750

• Id Trinity: TRINITY_DN50334_c0_g3_i2
• Name Transcript: Ll_transcript_489750
• Sequence: CCATATCATATTAATATGCATCAGTAGTATAGTCCAAAGCATCAAAGTCCTTTCTTCAATGGCCAAAAAAGAAGAGTATCTCCCTCTGTATGAAAAAGTT TGTCTAAAGAGAACATATAATAGAGTACTAGACTCCTTCATCTTACTCCTCCTCTTCTTGCTTCTATGTTATCGCCTTATCTCTATCAAAAACACATTTA CTATTCCATATTTCCTTGCTTTCTTATCTGAGTCTTGGTTCACTTTCACTTGGATTGTTATTCTCAACACTAAATGGAATGCTTCAGCTACTAAAACCCA CCTACAACTTCTCCTACAAAGGGTACCGGATCTTCCAGCAGTGGACTTGTTTGTGACAACAGCAGACCCTATACTTGAACCTCCAATAATCACAGTGAAT ACTGTGTTGTCTCTATTGGCACTTGATTATCCAGCTAACAAGCTAGCTTGCTATGTTTCTGATGATGGTTGTTCCCCTCTTAACTTTTATGCTCTTTTTG AAGCCTCTAAGTTTGCTATGCTTTGGGTACCTTTTTGTAAGAAGTACAATGTGCAACTCAGAGCACCCTTTAGATACTTTTCTGAACCTGCCAATACAAT AAGTGAAGGAGACTCACTACAATTCAAGCAACAATGGCTACAGATGAAGGATTTGTATGACAACCTTAGCAGAAAAATTGAAGATGTAACCAGAGAGCCA ATTCTACTCCCACATGATGGAGAATTTACAGTTTTCTCTAACACACATCCAAGAAATCATCCAAGCATAATCAAGGTTATATTGGAGAACAAAGAAAGTG TTTGTGATGAGGTGCCTCACTTAATTTACATATCCAGAGAGAAGAGGCCAAATCATCCACATCAATATAAAGCTGGAGCTATGAATGTTTTGACAAGAGT TTCTGGATTGATGAGCAATGCACCCTTTATGTTAAATGTTGACTGTGACATGATTGTGAACAATCCTAAGATTGTTCAACATGCAATGTGCATTTTGATG GATCCTAAGAAAGGGAAAGAGGTTGCTTTTGTTCAATGTTTCCAACAATTCTTTGATGGAATAAAAGATGACCCATTTGGAAATCAATGGGTATCTGCAT TTGAGTACATAATAAGGGGCATGGCAGGACTTCAAGGACCTTTCTATGCAGGAACAAACACCTTCCATAGAAGAAATGCCATTTATGGTCTTCACCCTGA TGAAATGGAAAATGAGAGAAAAGGAAAGATATCAATGCAACAATTTGGAAGTTCAAAGGAATTTTTCAAATCAGCAACTGGTGCTTTGGAAGGGAGTGCA TATTCTTCTAAACAGATTAGTCCTTCCAACTTCATTGAGGAAGCAATACAAGTAGCTGATTGTGCATATGAAAATGACACTAGTTGGGGTAAACAGTTGG GTTGGGTATATGGATCAATATCAGAGGATGTACCTAGTGGATTGAATATGCAAAGAAAAGGTTGGAGATCAGAAGGTTGCACTCCAGATCCAATTCCATT TACAGGATGTGCACCTGGAAGTTTAATCCCTACAATGATACAACAAAAGAGATGGACCTCAGGCCTTACTGTTGTATTTTTTAGTAAGCATTCTCCTGTT ATGTGTTCTCTTTTCGGTAAGGTCCAATTCAGGTCTGGTTTGTCCTATTGTTGGCTAACCAATTGGGGTTTGCGCTCTGTCTTTGAAGTAATCTATGCCG TTCTCCCTGTCTATTGCATAATTACCAACACCAATTTCTTGCCTAAGGGACTTGGCCTATGGATTCATGTTGCTGTTGCTGTGATTTATTACATTCATAC TCTAATAGAGTACCTTGCAATTGGGTTGTCAGTCCAACATTGGTGGAACAACCAAAGAATGAGCATAATAAGAACAGGAACAGCATCACTTATTGGTTTT TTGAGTGCCATGCTTAAGCTCTCAGGAATATCTGACACAGTCTTTGAAATAACACAAAAGGAAGAACCAACTTCTAGTTCTAATGATGAGGTTGATCCTG GTAGGTTCACCTTTGATAAGTCACCAGTTTTTGTGGTAGGCACCATCATTTTGATGTTGCAATTGACAGCTTTGTTTATCAACTTTATGGGGCTGCAACC ACCACCAGCATCAGGTAATAGTGGAAATGGTTCTGGGCTAGGGGAATTGATTTGTAGTACATATTTGGTACTGTGTTATTGGCCTTTTTTGAAAGGGCTA TTTGCCACAGGAAAATATGGGATTCCCTTGTCTTCTATTTTCATGTCAGCAGGGACTGTATTTTTTTTTCTGGTTTGTGTCAACCTTTAGTACTTATTAT CAATTATCAATTTAGTTACTGAATGAATAAAATGTACACGGAGAAGTTAGCCCCACATACCTATGGATGTTGTCGGCTCGGACATGATTGTCAGATATAA AGTGTTGAA
• Tissue: pods
• Gene name: LI_gene_176464;
• Additional information: details;

Expression of Ll_transcript_489750

FPKM

• PAB: 2.7
• PNAB: 0.6
• PS1: 0
• PS2: 0
• PS3: 0.1
• PW1: 0.7
• PW2: 1.6
• PW3: 1.9

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_489750

• Blastp: Cellulose synthase-like protein B3 from Arabidopsis with 43.74% of identity
• Blastx: Cellulose synthase-like protein H1 from Oryza sativa with 45.11% of identity
• Eggnog: Glycosyl transferase, family 2(COG1215)
• Kegg: Link to kegg annotations (AT2G32530)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019447721.1)
• Pfam: Cellulose synthase (PF03552.13)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;