Ll_transcript_488577

• Id Trinity: TRINITY_DN50335_c1_g1_i12
• Name Transcript: Ll_transcript_488577
• Sequence: GAAACACATTAACAGAACCACTTCCATTTTGTTCTCAAAACCGCTAGTAGGTCCCACCAATGGACGCAACCGCCACCGCACCCGCCGCCACCCCAGATTC CGCCACCACAGACGACCAAAATCCGTCGGCAGCAATAACGCGGTGGAAATTCGAGGTCTCAAGGCAGTACCAACACCTTCTGGATAAAACGACGCCGTTC GTTCTGTACCGTTGGATCGGGTTCTTTGTAATAGCGTTGATCTACGTTGTCCGCGTTTACTTCGTTGAAGGATTCTATGTCGTTTCGTACGGACTCGGAA TCTATATCCTGAACCTTCTGATCGGGTTTTTGTCCCCTCAGGTGGATCCAGAAGTTCTAGAACTTTCTGAGGGTCCCACACTTCCCACGCGAGGTTCCGA TGAGTTTCGCCCCTTCGTTCGTCGCCTCCCTGAGTTTAAATTCTGGTACTCAATCACAAAGGCATTTTGCATTGCATTTGTGATGACTTTCTTTACTGCA TTTGATGTTCCAGTGTTCTGGCCAATACTCCTCTTCTACTGGGTGGTCCTATTCACACTTACTATGAGGAGACAGATATCTCACATGATCAAATACAAAT ATGTACCATTCTCATTTGGAAAACAGGTAAATTTAGTTTTTCTTCATTTCAAATTGTTGTCATATATGTTGTATGGGTATTGGTCCATCAAATGGCATTT TAACATGTCAATATCTTCAGTGCTAATGATAAGACTTTGTTTTTGTTTATCTCACTTTTAGCGTTATAACGGAAAGAGAGCAGCAGAAAGCACAAGCCTT TCCGAGGACTAAAATTTTCAGGTTAATTGAACTTTATTTGCTTCATTTAAGTCACAAATCCGCATGTGGCGTGACATCATTTGCAGTATATTTTAACAGC TGGAGCAATCTGAGGATGTTGTGGTGGCTGACAAAGATTGCTTTGAAGTCTCTTGTTGACAACTGAATGTTCAATTCTCATTTGAGCAATTGTTTGAACA TCTTCGATGTTTTTAGGCCCTAGTAAAAGATTTAACTTTGGGGATATGTTGGGGTTTCTGATGGTTTGTTCTTGACCTGAAACCCTTTTCTGTTATTTTC TGTTTCTATATAGGTTATCAAATGAATCTTATTGCTGAATTTTTAGTCAAATAACGAGAACTTTAAGTAGCTTGTGTAGAATGAAATCAATGAATCCCCT TCATTATTTGCAATGCGGTCACACTGATCTATCTTTGAAGTGTATGTGTTTTCATTTTTGTTAAAGCCCTCCTTCATAGGAATTTTCTAGAAAGTGGCCT AAACTCCAGACAATATGCTTTTTCTTTTTATGTAACCTAATTGTTTTTCTTTGACTCTGCACAAAATTTTCAATTATCATTCATAAAAATGTGAAGTTTC TTTTTGATTTTGATGAAAAGATCACTTGGTCCATTGGAGTTTTCTTTTGCAATTGGGTCTGTTTATGGGGGGGAACCTCTTTCATAGTTCATACCCCCTC ATGAAACAAGAGACATGATGCATCTCATTGCTATAAGGTCC
• Tissue: pods
• Gene name: LI_gene_176470;
• Additional information: details;

Expression of Ll_transcript_488577

FPKM

• PAB: 0.9
• PNAB: 0.8
• PS1: 0.7
• PS2: 1.4
• PS3: 1.7
• PW1: 0.5
• PW2: 1.6
• PW3: 1.9

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_488577

• Blastp: Protein RER1A from Arabidopsis with 69.49% of identity
• Blastx: Protein RER1A from Arabidopsis with 76.58% of identity
• Eggnog: RER1 retention in endoplasmic reticulum 1 homolog (S. cerevisiae)(COG5249)
• Kegg: Link to kegg annotations (AT4G39220)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019446804.1)
• Pfam: Rer1 family (PF03248.12)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;