Ll_transcript_488596

• Id Trinity: TRINITY_DN50335_c1_g1_i24
• Name Transcript: Ll_transcript_488596
• Sequence: GAAACACATTAACAGAACCACTTCCATTTTGTTCTCAAAACCGCTAGTAGGTCCCACCAATGGACGCAACCGCCACCGCACCCGCCGCCACCCCAGATTC CGCCACCACAGACGACCAAAATCCGTCGGCAGCAATAACGCGGTGGAAATTCGAGGTCTCAAGGCAGTACCAACACCTTCTGGATAAAACGACGCCGTTC GTTCTGTACCGTTGGATCGGGTTCTTTGTAATAGCGTTGATCTACGTTGTCCGCGTTTACTTCGTTGAAGGATTCTATGTCGTTTCGTACGGACTCGGAA TCTATATCCTGAACCTTCTGATCGGGTTTTTGTCCCCTCAGGTGGATCCAGAAGTTCTAGAACTTTCTGAGGGTCCCACACTTCCCACGCGAGGTTCCGA TGAGTTTCGCCCCTTCGTTCGTCGCCTCCCTGAGTTTAAATTCTGGTACTCAATCACAAAGGCATTTTGCATTGCATTTGTGATGACTTTCTTTACTGCA TTTGATGTTCCAGTGTTCTGGCCAATACTCCTCTTCTACTGGGTGGTCCTATTCACACTTACTATGAGGAGACAGATATCTCACATGATCAAATACAAAT ATGTACCATTCTCATTTGGAAAACAGCGTTATAACGGAAAGAGAGCAGCAGAAAGCACAAGCCTTTCCGAGGACTAAAATTTTCAGCTGGAGCAATCTGA GGATGTTGTGGTGGCTGACAAAGATTGCTTTGAAGTCTCTTGTTGACAACTGAATGTTCAATTCTCATTTGAGCAATTGTTTGAACATCTTCGATGTTTT TAGGCCCTAGTAAAAGATTTAACTTTGGGGATATGTTGGGGTTTCTGATGGTTTGTTCTTGACCTGAAACCCTTTTCTGTTATTTTCTGTTTCTATATAG GTTATCAAATGAATCTTATTGCTGAATTTTTAGTCAAATAACGAGAACTTTAAGTAGCTTGTGTAGAATGAAATCAATGAATCCCCTTCATTATTTGCAA TGCGGTCACACTGATCTATCTTTGAAGTGTATGTGTTTTCATTTTTGTTAAAGCCCTCCTTCATAGGAATTTTCTAGAAAGTGGCCTAAACTCCAGACAA TATGCTTTTTCTTTTTATGTAACCTAATTGTTTTTCTTTGACTCTGCACAAAATTTTCAATTATCATTCATAAAAATGTGAAGTTTCTTTTTGATTTTGA TGAAAAGATCACTTGGTCCATTGGAGTTTTCTTTTGCAATTGGGTCTGTTTATGGGGGGGAACCTCTTTCATAGTTCATACCCCCTCATGAAACAAGAGA CATGATGCATCTCATTGCTATAAGGTCC
• Tissue: pods
• Gene name: LI_gene_176470;
• Additional information: details;

Expression of Ll_transcript_488596

FPKM

• PAB: 12.2
• PNAB: 14.7
• PS1: 15.1
• PS2: 11.8
• PS3: 17.1
• PW1: 15.8
• PW2: 16.1
• PW3: 10.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_488596

• Blastp: Protein RER1A from Arabidopsis with 66.67% of identity
• Blastx: Protein RER1A from Arabidopsis with 72.94% of identity
• Eggnog: RER1 retention in endoplasmic reticulum 1 homolog (S. cerevisiae)(COG5249)
• Kegg: Link to kegg annotations (AT4G39220)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019446804.1)
• Pfam: Rer1 family (PF03248.12)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;