| Id Trinity | TRINITY_DN50335_c1_g1_i9 |
|---|---|
| Name Transcript | Ll_transcript_488574 |
| Sequence | GAAACACATTAACAGAACCACTTCCATTTTGTTCTCAAAACCGCTAGTAGGTCCCACCAATGGACGCAACCGCCACCGCACCCGCCGCCACCCCAGATTC CGCCACCACAGACGACCAAAATCCGTCGGCAGCAATAACGCGGTGGAAATTCGAGGTCTCAAGGCAGTACCAACACCTTCTGGATAAAACGACGCCGTTC GTTCTGTACCGTTGGATCGGGTTCTTTGTAATAGCGTTGATCTACGTTGTCCGCGTTTACTTCGTTGAAGGATTCTATGTCGTTTCGTACGGACTCGGAA TCTATATCCTGAACCTTCTGATCGGGTTTTTGTCCCCTCAGGTGGATCCAGAAGTTCTAGAACTTTCTGAGGGTCCCACACTTCCCACGCGAGGTTCCGA TGAGTTTCGCCCCTTCGTTCGTCGCCTCCCTGAGTTTAAATTCTGGTATATCTCCGTTTTTTCATTTATTGATTTTCTTAATTGATTGTTTTATAGTTCT AGGGTTTTTTAATTGAATGGTTGAAATTGAGAATTGAGGATGGTGTTGTTGGTAATTCGTGGGTGTGATTGAATTGTGTGGAGGTGTTGGTTGAATGTAT GTGTTTTGTGTAATTTAAGGGTTTGCTTGTTTGAGGTGGAAAATTGAAACTTTAGCATGGGTTAATGAATGCACACATTTGGATAATTTGATTCGATGGA GAGATAAATCGTGGCTCTTTCCGTTGTGCAAGAGGTAGGAAATAATGGTGATTCAAGATGAAGCTGAATCTATGAAACGCCAATGCTTCACAATAATCGT GTATTAATAATTTTTGTACCTTTACTTTTGAATTTTGTAGATCATTATTAATGGAAATGCCACAACTATTAGATAAATTTTACTCATGCTAACTTTTGAA ACATTATTTGTCTCTTTTAGTTAAAGATTTGTTTTGAGAATGGGAGTGATAATTGTGTGTTATGCCCATGATGAAGAAGTTTCTCATAGTTTCAACCATA TAGTCGTCCAAAGAGAGAATTTGAGACCGGAGGAAATTTGATAGAAGTAATTCAATTTCCTTATACTTAGCATTTTAGCTTCAGAGGAGATCGGTCTGCA TAATGTGGAAAAGAGTCAAAGACTAGTTGCAAGATTTTGTACCGTACTCTGTTTGAGTTGTTATATATCGTGTTATTAATGTGAAGGAAATTGTAATCAT GCGTGAAACCAAAAGGATAAGCATTTCACATGAGCAAATAGATTTAACCTGTCGGTTCTATACTGACAAAAATCTAGATTTTCATTCATGCAATTTATGA GCTGTTCAATGTTCCTACACTACAAAACACTGAAAATAGTATGACATAATATTATTAACAATGATGAGCTCTGCATAGAGATCTTAATGGAGAGAATATT TTCATAGTTCTTATGGTCGTTATTGACATATACTTCTGCTTGCTTTATTACTTTGAAATTACTAATCAGAGGGTTTTTCGATATTATATTCGCTTCGGTA CATGAAGGAGATGTCAAATATTTGGGTATTGACATGCAAATGCTGCTTCTATTGATGCTGCTTTATTTTCTGTTGACAGGTACTCAATCACAAAGGCATT TTGCATTGCATTTGTGATGACTTTCTTTACTGCATTTGATGTTCCAGTGTTCTGGCCAATACTCCTCTTCTACTGGGTGGTCCTATTCACACTTACTATG AGGAGACAGATATCTCACATGATCAAATACAAATATGTACCATTCTCATTTGGAAAACAGGTAAATTTAGTTTTTCTTCATTTCAAATTGTTGTCATATA TGTTGTATGGGTATTGGTCCATCAAATGGCATTTTAACATGTCAATATCTTCAGTGCTAATGATAAGACTTTGTTTTTGTTTATCTCACTTTTAGCGTTA TAACGGAAAGAGAGCAGCAGAAAGCACAAGCCTTTCCGAGGACTAAAATTTTCAGGTTAATTGAACTTTATTTGCTTCATTTAAGTCACAAATCTATATG TGGTTTGATATCATTTAGATTATATTATAATAGACAGAGGAATCTGAGGATATGGTTTGGACTCTTCATCTAATGTTGAATGATGATCTGCTATACTATT TATTTTTAGAAACCTCCCATAATTCCAAAGAGCCTTCTGGTTCTAAGTCACTAGATTGCATCATATGAAATCTTTCGTTTCTTGCATATCATAATAATGA CTCATGAAATTACCTACATACTGGTGCATTAAAGCACTTGAGGCTTACATAAACTATTGAATCAGGCACCAATTGATTGGAGAAGACAGATTAACCAACT TTGGTTTCATGTCAGGGATGTCCAATGAATATTGAAGGGACTACTAAGGTGAATATTGAAGGGACTACTAAGGAACCCCTGCTCTCACATCTAGAGGCTT TGCCGAGGAAGATTTTAAAAAAGTAGCCGAGTTCTTTATGAGGCAGTCAAGTTAGCCTTACAGATTAAGGCAAATTCCCAAGGTTGACCCTAGCCTACCT TCTTGCATCTTAGTTCTATGTGTCATGATATTTGTAGTTTTGAAATCACAGCAAGGTATCATAGATGTAACTCATGCTTGTTCACTCCTTATTGTTTATA TTAATTTCAGGTGCAAACTTCAAAGATTTGGTAGCAGCTATGCATTCTGATGCACACATTCAACCCAAAATTGCTAAAGTATGCCATGAAGTAGACATAT TCTTGCGGTGTTCTTAGTGAATAAGAATATTTGTTATGTATTTTGTTTTTAAAGTGTCATATGAGACTATTTTTAGTTTTTTGAGATTTCATGGTGTGGT TGGATTTATAATGAAGGATGTAGTATAACTCTTTCAATTTTGTTACACTACCTTGGTTATTTGCAATAAAATTTTATTATTGTAAGAACATTGTATTTAA T BLAST |
| Tissue | pods |
| Gene name | LI_gene_176470; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_488574
| Blastp | - |
|---|---|
| Blastx | Protein RER1A from Arabidopsis with 67.92% of identity |
| Eggnog | RER1 retention in endoplasmic reticulum 1 homolog (S. cerevisiae)(COG5249) |
| Kegg | Link to kegg annotations (AT4G39220) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019446804.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |