Ll_transcript_488992

• Id Trinity: TRINITY_DN50337_c3_g6_i1
• Name Transcript: Ll_transcript_488992
• Sequence: GAAAGAACATCAAGTATACAAGCTAAGGAAGGCACTATATGGACTCAAACAAGCACCAAGGGCTTGGAACAAGATAATTGATTCATTTCTCTTCAAATTG CAGTTTGACAAATGTGAAGTAGAACGTGGTGTTTATGTTAAGAAGTGTGAAGATGGAGACCTAATGATCATTTGCTTGTATGTAGATGACCTGCTAATCA CAGGATCAAACTCAGAGAAGATTGAAGAGTTCAAAAGAGTGCTAGAAGCAGAGTTTGAAATGACTGATTTGGGCAAACTAAGCTACTTCCTTGACATGGA GTTCACATATACTTCTGCAGGGCTATTAATGCACCAAAGCAAGTATGCCAAAGAATTTTTAGAGAGATTCAACATGAATTCTTGCAATGCAGCATCAAAT CTAGTTGAGACAAGTGTGAAACTCAACACTGATGAAGATGGTGAATCAGTGGATGCTACACAATTCAAACAAATAGTAGGATCATTGAGATTTTTGTGCA ATACAAGGCCTGATCTCATCTATGGGGTAGGACTTGTGAGTAGGTTTATGTGCAATCCAAAGAAATCAAACATGCTTGTAGCAAAAAGGGTGATGAGGTA TGTACAAGGAATCATTGATCAAGGCGTTTTGTTTCCAACAAATTCTGCACAGAAACAGAATGCAGGGGTTGAAATCACTGGGTATGCAGACTCAGATTTT GCAGGGGATTTGGTTGAAAGAAAGAGCACCTCAGGTTATCTATTCTTGTTGAATGATGCACCAATTGCATGGTGTTCCAAGAAGCAACCTGTTATAGCCC TATCCAGCTGTGAAGCAGAGTATATATCAGGTTCCTATGATGCATGTCAAGCTGTTTGGCTTGAAGAATTGATGAAGGAGATGAAGATTAGTGTCAAGAC ACCAATGCATCTCAAGATAGACAATATCTCAGCTATAAGCTTGTCCAAGAATCCAGTGAGTCATGGAAGAAATAAGGACATAGAAGTTAGATTTCATTTT CTTAGAAATCTAGTGAACAAGGAAAGGTTGAGATTTGAGTATTGCAAGACTGAATTTCAGTTTGCTGATGCTTTCACCAAGGCATTAAAGAGCATCAGAC TTGAAGAGTTAAGGAAGAAGATTGGTATGGCATCACTTAAGGAACTTGGCTTAAGGGAGGATGTTATAATATAATCCAAGTTTTGTGTAAATAGGAGTTA GTTTGCTTAACTAATAGTTTCCAATTTTAGCATGTGTTCAATTTGAAATTCTGTTTTGTTAGTTAGGAAGCTTCTATATAAGGAAAACTTTGTTTATTCA TTTCTCAATAAAGCAAAGAGGCATTATTCAATACACATCTTCTTCTCCATTCTCTATTCTCTTCTTTTCTTTTTTGTTCCAACACTTATAAGAAGGTGAG CGTCAACATAAAGGTGAGGTTGTTACCTTATGGCATGGAGATAGAGGTGGCAATTTGGGCTGCCCAGCTGAGTTCGACATGGCCCATTTCTGGCTTGTCC TTGATCGAACCAGGCCCAAAATGCTCAGGGTTATTCGGGTTTAAAAAACTAGTGATTAAACCCAATAGCAGCCAAAAAATAACTAATTTTAACAAATTTG GATGGGCTTTTAATGGTCTGACCTGGTTATGGCCAGCATGAACTAGGCTGAAATGACCCAGGGTCTATTCAGGAGGGCTGTAATGTAGCTAAACCTGCCC ATTTATCAGATGGCTCAATCCGGCCCATGTTGCTAGCTCTACTTGGTAGTAATGAGTTCAAATCTTAGAAACAACCCG
• Tissue: pods
• Gene name: LI_gene_176496;
• Additional information: details;

Expression of Ll_transcript_488992

FPKM

• PAB: 0.1
• PNAB: 0.3
• PS1: 0.1
• PS2: 0.2
• PS3: 0.6
• PW1: 0.2
• PW2: 0.3
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_488992

• Blastp: Copia protein from Sophophora with 37.11% of identity
• Blastx: Copia protein from Sophophora with 37.11% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_014625999.1)
• Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) (PF07727.13)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;