Ll_transcript_489121

• Id Trinity: TRINITY_DN50346_c0_g3_i2
• Name Transcript: Ll_transcript_489121
• Sequence: GAAGCCTTTGGTTCCAAGCTTTCCTTGCTTTGCCAACATCTATGTCTCCCTCATGGAAAAGCCACATGTTGACTTTGGGCTAAAGCTTGTAGGGGCTGAT CTTATGTCTATTCCTGGTGTCTACAGGTTTGTTCAGGATCTTATCAAAGAGCAGGTTGCAAACATGTATCTATGGCCCAAATCCCTGGAAGTTCAAATAG TAGATCCAACAAAAGCCATGAGGAGGCCTGTTGGAATTTTACACGTGAAGGTTCTGAGAGCAATGAAGTTAAAGAAGAAAGATCTTCTTGGTGCATCTGA CCCTTATGTGAAGCTAAAGATGAGTGATGATAAGATGCCGTCGAAAAAGACTACTGTCAAGCACAAGAACTTGAATCCTGAATGGAAGGAGGAATTTAAT TTGGTTGTCAAAGATCCCGAGTCCCAGGTTTTAGAGATTAATGTTTATGACTGGGAGCAGGTTGGGAAGCATGACAAAATGGGTATGAATGTGATCTCTT TGAAAGACGTCCCCCCTGAAGAGCCTAAAGAATTTACTCTTGCCCTCCTAAAAAATATGGATTCTAATGATGTCCAAAACGAGAAGTCACGTGGGGAGGT TGTTGTAGAATTGACATATAAACCCTTCAAGGAGGATGAGTTGGACAAGGGTTTTGAAGAGACACAGGCAGTACAAAAAGCTCCGGAAGGTACTCCTGCT GGTGGAGGTCTGCTTGTAGTTATACTCCATGAAGCTCAAGATGTTGAAGGGAAGTACCACACTAATCCATATGCCCGGGTTACTTTCAGCGGGGAGGAGA AGAAGACTAAGCGTATTAAAAAGAACAGAGATCCAAGATGGGATGAAGAATTCCAATTTACGTTGGAGGAACCTCCCACTAACCAAAGGTTACATGTGGA GGTTATCAGCACTTCATCAAGAAACCTGCTTCATCAAAAGGAATCATTGGGTTATATCGACATAAGTCTGGCAGATGTTGTTTCTAACAAGAGAATCAAT GAGAAGTTTCATCTTATTGATTCCAAGAATGGGCGCATCCAGGTAGAGTTGCAATGGAGAACTTCATAAGCACCATCACAAATTATTCTTCATACTTGTG TTTCCTTTTTATTTGTCAATCATGTACAAGCTTCTAATAAAAATTGTTGAAAATATATAAACTATATGAATGATTAATGATGTGTATTTATTTTGGTATG CCTCTTTCCTTCCCTCACTTGTATCTTTATTTTCTTATTGTAACTTAGTGGTATTTCTAGCATCTTTGGCTTTTAACATAAGCACTCAAGAATTCACTGG TGCATTTTGGAGGGAATAATAAAAGGATTTGCATG
• Tissue: pods
• Gene name: LI_gene_176573;
• Additional information: details;

Expression of Ll_transcript_489121

FPKM

• PAB: 33.2
• PNAB: 44.5
• PS1: 56.6
• PS2: 32.3
• PS3: 47.2
• PW1: 82.1
• PW2: 56.3
• PW3: 37.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_489121

• Blastp: Synaptotagmin-2 from Arabidopsis with 70.71% of identity
• Blastx: Synaptotagmin-2 from Arabidopsis with 71.83% of identity
• Eggnog: Domain-Containing protein(COG5038)
• Kegg: Link to kegg annotations (AT1G20080)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019450982.1)
• Pfam: C2 domain (PF00168.29)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;