Ll_transcript_489132

• Id Trinity: TRINITY_DN50346_c0_g3_i6
• Name Transcript: Ll_transcript_489132
• Sequence: GAAGCCTTTGGTTCCAAGCTTTCCTTGCTTTGCCAACATCTATGTCTCCCTCATGGAAAAGCCACATGTTGACTTTGGGCTAAAGCTTGTAGGGGCTGAT CTTATGTCTATTCCTGGTGTCTACAGGTTTGTTCAGGTATAGGACAATGTCTTTTTGATCTGATTTATTTATTTTCCCCGTTTTTCTTATCTTAATGTTT GAGTCTTAAAGTTGCTTACATTCATCTTTTACTGTTAAGGGGAAGTAGTCACTGCCTTGCATAATAGACCGTCTCCCCTTTGGTAAAAATGAACCAACGC CTGCTCAGGCAAATCTTATTTTGAAATATGTGATCTTCTCAATGCATCCCATTGATTTGTTTATGTATAAAGTATCTTCTTGCCTGCTTGGATGAGAGAA CTATCATGGAACTAGTTCTGGATCAAACTAGAGTTACTATTTGCATGTAATGGATAGGAATTTGATGGCTTGAGAAGTAAGAACCGCTTTCTTTCTATCC TCCTCTAAGCCATGTTAGTAATTGAATGACTTATATATTGTCGATGATACTATTAACAAAAATAGAGATCTGTGTTGAATGGTTTGTGGGCTTGTTACTG TTCATTGAGGGTAAAATTGTAGGTTCTTGTAGATGAATATAGACTTAAAGTGACGTGTGGTGCCAGAAGGGTGCTGTTACCCTTTGTAATCTGGTATTTT TGAAATTAGCCATACAGTAGCTGTATTGATTATAAGGGAAAATTTGATTTGATTGGACACATCTGCTGGGTTGAAAGATTTTGATGGTCATATTAATTGC TTTCCATTCTATCATTTATACTGTTCTCTCTTAAGTTTTATCATAAAGAACAAAGTTAAATTAGAAAAGGGAAAATCAGTTATAATATTGTGGCACATAT ATCACATATTCTTTGGTCTGGGGACATTTGCGGTTTGTGGCTCATAGTGAAGATACAAAAAATATCCTTTATAGCATATCACTGCTCTTGGCATTGTCCT TTATTAGTACCTCATTGAAAGATTTGTGGTTTTTAAACTAATCTGAAGTGTGATGTTTTCAGGATCTTATCAAAGAGCAGGTTGCAAACATGTATCTATG GCCCAAATCCCTGGAAGTTCAAATAGTAGATCCAACAAAGTATGTTTCTGGATTTTTCTAAATTATTTGTTACGATGGTACTTTAATTGTAACACCTCTG TTTTTCTTTTAAATGCTATTGGGAACCTCAGAGCCATGAGGAGGCCTGTTGGAATTTTACACGTGAAGGTTCTGAGAGCAATGAAGTTAAAGAAGAAAGA TCTTCTTGGTGCATCTGACCCTTATGTGAAGCTAAAGATGAGTGATGATAAGATGCCGTCGAAAAAGACTACTGTCAAGCACAAGAACTTGAATCCTGAA TGGAAGGAGGAATTTAATTTGGTTGTCAAAGATCCCGAGTCCCAGGTTTTAGAGATTAATGTTTATGACTGGGAGCAGGTTGGGAAGCATGACAAAATGG GTATGAATGTGATCTCTTTGAAAGACGTCCCCCCTGAAGAGCCTAAAGAATTTACTCTTGCCCTCCTAAAAAATATGGATTCTAATGATGTCCAAAACGA GAAGTCACGTGGGGAGGTTGTTGTAGAATTGACATATAAACCCTTCAAGGAGGATGAGTTGGACAAGGGTTTTGAAGAGACACAGGCAGTACAAAAAGCT CCGGAAGGTACTCCTGCTGGTGGAGGTCTGCTTGTAGTTATACTCCATGAAGCTCAAGATGTTGAAGGGAAGTACCACACTAATCCATATGCCCGGGTTA CTTTCAGCGGGGAGGAGAAGAAGACTAAGCGTATTAAAAAGAACAGAGATCCAAGATGGGATGAAGAATTCCAATTTACGTTGGAGGAACCTCCCACTAA CCAAAGGTTACATGTGGAGGTTATCAGCACTTCATCAAGAAACCTGCTTCATCAAAAGGAATCATTGGGTTATATCGACATAAGTCTGGCAGATGTTGTT TCTAACAAGAGAATCAATGAGAAGTTTCATCTTATTGATTCCAAGAATGGGCGCATCCAGGTAGAGTTGCAATGGAGAACTTCATAAGCACCATCACAAA TTATTCTTCATACTTGTGTTTCCTTTTTATTTGTCAATCATGTACAAGCTTCTAATAAAAATTGTTGAAAATATATAAACTATATGAATGATTAATGATG TGTATTTATTTTGGTATGCCTCTTTCCTTCCCTCACTTGTATCTTTATTTTCTTATTGTAACTTAGTGGTATTTCTAGCATCTTTGGCTTTTAACATAAG CACTCAAGAATTCACTGGTGCATTTTGGAGGGAATAATAAAAGGATTTGCATG
• Tissue: pods
• Gene name: LI_gene_176573;
• Additional information: details;

Expression of Ll_transcript_489132

FPKM

• PAB: 0.4
• PNAB: 0.6
• PS1: 0.5
• PS2: 0.1
• PS3: 0.1
• PW1: 0.5
• PW2: 0.6
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_489132

• Blastp: Synaptotagmin-2 from Arabidopsis with 69.47% of identity
• Blastx: Synaptotagmin-2 from Arabidopsis with 69.47% of identity
• Eggnog: Domain-Containing protein(COG5038)
• Kegg: Link to kegg annotations (AT1G20080)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019450982.1)
• Pfam: C2 domain (PF00168.29)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;