Ll_transcript_488891

Id TrinityTRINITY_DN50351_c0_g3_i15
Name TranscriptLl_transcript_488891
SequenceAAGAAGTCTTTCAAAAACCCTCAATTTCCAATACGTACTCGTTTCCCTCCGAGCAAGGAGCATATTTGTGCGTTTTCACTGAACTGTAACACGCACCGTT TAGTCCTCTAACACTTCATTTTGACCTTCGGAGAAAATCCAACTCACTCATAGTTCAGCATCGCAGTGTGTCTGAGAAATGGATGCAAAACTCAACGGAC CCACCGTTTCGTTGAGCTCCACCGGCGGCATCGCCGTCACAACATCTTCTTCCTCTACGCTACAACCAAACTACAGTAGCCGATTAGTTCAGGAAACATT GAACCACTTGGCAACAATTGATCTAATTGAGTTGTGCAAGGAAGCGAAAGTTGAGTGCTGCAGGGCAACTAGGGATCTGAGAAGCTGTGGTCGCTATGTC CACCATGTGTTGAATTCATGTGGCCATGCTTCATTATGCGAAGAATGTAGTCAACGGTGTGATAACTGCCCAATTTGTAGAATCCCAATTCCACAAACTG GTGCTAGATTGCGTCTCCGACTTTATTATGAGTGCATAGAAGCTGGTCTTATTTCTAGAAGGTGTGATGATGGGTTTGAAGAAATAGAAGACGGGGAGAA ACAACTAACTGCGGATGTCCAATGCCTTTATTCTTTGTTTGATGTTGCACTCGAGAATAACATGGTTTCTTTAATTTGCCATTACATTACAGATGTATGT ATGGATGAAACTGCTGTTTCCTGTGATCCCGTCGTAGCATTTTTGTTGGATGAAGTGGTAGTCAAGGATTGGTGCAAGAGGACATTCAAAAACATATTAA CTGAACTACATGGAATTTGTATCCTCAAAACTTGTTTAATGTTTCTATCTAAAGCTTGTTACAACTTACAATTGTGTTCTTTATGAGACTCAGTAATGCT TGTTATCTCTAACAATCTTCACCAGATAATCTTGATGTTTTAGGAATGAAAGGGAGATTGAGCTCGCTTATGAAATTTCCATTATATTTTAGGGGAATAA CAAATGTACTAGAAATTCTAGAGTCATCTTTTAAGGGCACCCTTTCAGCGCAACTTCATGATTTGCACCATCTCCATGAGAGCATATTAAAGGCGAAGCA GCATCTGGAGATTATCATTTGGTGTACCAGACATCACTTTTTGGAGGATGTGGAATCTCGTTTTACTGATATTTCATCATGGGCTTCAGTTGTCCATAAA CGTAAATCAGAAGCAATTAGACGTGCTTGGCCTGATGCAATAAACCAATCAGTGGAGTCAACAGGACACATTGGATCTCTATTTATTGAAGATGCATTGA ATAGTCTTGATTTGGAGGAGAGCTTAGTACAGGAAATTGAAGGAGGATTACAAGTTTCATCCTTGCAGATGGATGGAACACTATCTTTTAGATCTAAAAC TGATCAGGTGCTGAGTTGCTATCCCTTCAAAAATCTCCGTACAGCTGCTGACTTACTCTTTTTACATGGAAGTTCTGATACAGTGATTGCTAAACAAGCA ATTTTTCTGTATTATTTGTATGATCGCCACTGGACAATTCCTGATGAACAATGGAGACATATAGTAGAGGACTTTGCAGCTACCTTTAGCATTAGCAGGC ACTCGTTACTTGAGTCTTTAACTTTTTACCTTCTGGATGATCACACAGAAGAAGCTTTACAGGAAGCTTGTCGCCTTCTTCCTGAGATGTCTGGTCCAGT ATCACATCCCAAAATTGCTGAAGTACTGTTAGAAAGGGGTAGCCCTGATACAGCTCTTATGGTTTTAAGGTGGACTGGGCGTGATAGTGGACCACACATG ATTTCACTCAGAGATGCTGTAACTGCAGTGCGGGTGAGGGTTGAGTGTGGGCTTCTGACTGAAGCATTTATGCATCAGAGAGTTCTCTGGACCAGAGTGA AGGAAAAAAAATTCAATAAAGGCGCACTTGGGGATACTTCTGACAAACTAAAAGGCCAATGTAGTAATTGGGTGGAGTGGGTGGAGGCCTTGGTAGCTGA GATTTGTTTTCTCTGTATTAGGAGGAACTTGGTTGATCGAATGCTAGAACTGCCATGGAATTCTGACGAAGAGAAATATATACACAAATGTCTTTTGGAT TATGCCATTGAAAACCCCCATGGGACTACAGGAAGTCTTCTTGTTGTGTTTTACATTCAGCGCTACAGATACTCTCAAGCATACCAAGTCCATATTAGAC TTGAAAATATAGAGCAAGACTACATTTCAAAAGGTTCTATAAGTGAAGAATTTCTACCAAGATTGGAAACTGCTATTCGGTGGAGGGCCAATTTGGTTAA TAGATGCTTGGAGTTGTTGCCAGAAACTGAGCAGCACAAATTGAGGAGCGGAAACTTGACCGAGGACACTGTTACTTCTCATGAAGAAGTTGAAGTCCCT GCTAAATTTGATGTTCCTCCAATTCAGGATTCCAGATCCACCAGTTTATTGATTCCCTCGTCTGCTAACTCTTCCTCTATGCGGCATAATGATCATACAA CTGGTTTGCTGAGTTCGTCGACTTTAGGAACTTCAACCAAATTAGGCATACCTTTCCCTACTACTGGCCCTGAGCTCGGTAATTTCGGTTCCCCATCTTA TCGCCATGAGGGGTTACTTATCAGTAATGAGAGTGTGGCAAATAACAGAGGTAAAACTGGAAACGTTCTTAGATATGATAACACTCCAACTCCAAGGAAT CGTAGGATCCGTTTCAGGAATGGTTCACCTTTGAAGGGAGTTAACAGAACATCACCAAGCAGTTCCCAGGAAAATAAGGTGGAGAAAATCCCGCCAGGAG TTGAACATAATTTGCTTTTTGGTAATTATCAAACTACCCCCCATGGGAGGGGGGCTAAAGCTAAGCATGATACTAGATCTGGGCGCAGCTATTCGAAAGA GTTTGCAAATGACCTACCAAATATGTCTAGCTGGAATGTCAAAGCACATAAAGATGATAGAATTTGGAATGTAGAGTCTACTGGTGATCCAATGGAGGTT TCTCAGAGCTATGTGGAAAAGAAATTAGATATGGGAGAAAATATCAATGGTGGACCTAGATGGAGATCTGATGAAACAAGTGATGAGGATGAGGAGCAGG GCCTGGAAAAAGCCATGGATATAGCTCACTATGCAACTCCAACTAGGACAACTAGAAGAAGCAGATTTGCCATGAGATGAAAACACAAACCTTTTTAATT CACTAAAGCTTTGTTTGTGAGTTGGTTTGTGAAGGAAGGGAAATCCCTGAGAGTCATGAAATATACTTGTGAGATTGTTTTGAAGCTTTCATTTTCTCTT CATTCCTTTATGAAACCCAATCCACAAACAAAACCTAAAGAATTCTGGAAAGTTTCTGGATGAGTAGAAAGTTAAGCAAATTTGCTATGAGGATAAGAGC TCTGCCGCTTTGGGAATTCTAGTTTTCAAGTTTTTACTTTATGCATATACAGTGGTTTTAGTTGTGCAGCTAATATTCAGTAAGGGAAATGATAATTTTA GAGGTTCATTTCCGAACCCTTTTCCTTCAATCATTGTAAGAGTTATAATTCTAGCCTTGTAGATCAGTTCTTTAAGGGTTAGTTTAGGAGATGGATTTTG GAGGGGAATGGTTAGTTTAGGAGATGGATTTTGGAGGGGAATGGTTAGTTTAGGAGATGGATTTT BLAST
Tissuepods
Gene nameLI_gene_176601; 
Additional informationdetails; 

Expression of Ll_transcript_488891

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_488891
BlastpE3 ubiquitin-protein ligase HOS1 from Arabidopsis with 45.05% of identity
BlastxE3 ubiquitin-protein ligase HOS1 from Arabidopsis with 44.69% of identity
Eggnoge3 ubiquitin-protein ligase(ENOG4110YTD)
KeggLink to kegg annotations (AT2G39810)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019423958.1)
PfamNuclear pore complex assembly (PF13934.5)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;