Ll_transcript_488882

Id TrinityTRINITY_DN50351_c0_g3_i9
Name TranscriptLl_transcript_488882
SequenceTAGAAATTTCCCTCCGAGCAAGAAGTGATTCTGAACAGAGAACATAAGTGTATTGTAAAACGCACCGTTTAGTTATCTAACTCATCATTTTGCTCTTTGG AGAAAATCTGAATCACTCAGAGAGAGAGAGAGAGAGAGATGGAACGAAATCTCAACGATCCTACCGTTTCGTCGATTTCCTCTAATGCAAGATCTTCTTC TTCAACGCTTCAACCTAACTATAGTAGCCGATTAGTTCAGGAAACGTTGGAACACTTGGCATCCATTGATCTAATTGACTTGTGCAAAGAAGCGAAAGTT GAGCGATGTCGGGCAACTAGAGATTTGAGAAGCTGTGGTCGCTATGTCCACCATTTGTTGAATTCATGTGGTCATGCCTCATTATGTGAAGAATGTAGCC AGCGGTGCGATAACTGCCCAATTTGTAGAATCCCAATTCCAAAGACTGGTGCTAGACTGCGTCTCCGACTTTTTTATGAGTGCATAGAAGCTGGTCTTAT TTCTAGAAGGTGTGATGATGGGTTTGAAGAAATAGAAGACGGGGAGAAACAACTAACTGCGGATGTCCAATGCCTTTATTCTTTGTTTGATGTTGCACTC GAGAATAACATGGTTTCTTTAATTTGCCATTACATTACAGATGTATGTATGGATGAAACTGCTGTTTCCTGTGATCCCGTCGTAGCATTTTTGTTGGATG AAGTGGTAGTCAAGGATTGGTGCAAGAGGACATTCAAAAACATATTAACTGAACTACATGGAATTTATAATCTTGATGTTTTAGGAATGAAAGGGAGATT GAGCTCGCTTATGAAATTTCCATTATATTTTAGGGGAATAACAAATGTACTAGAAATTCTAGAGTCATCTTTTAAGGGCACCCTTTCAGCGCAACTTCAT GATTTGCACCATCTCCATGAGAGCATATTAAAGGCGAAGCAGCATCTGGAGATTATCATTTGGTGTACCAGACATCACTTTTTGGAGGATGTGGAATCTC GTTTTACTGATATTTCATCATGGGCTTCAGTTGTCCATAAACGTAAATCAGAAGCAATTAGACGTGCTTGGCCTGATGCAATAAACCAATCAGTGGAGTC AACAGGACACATTGGATCTCTATTTATTGAAGATGCATTGAATAGTCTTGATTTGGAGGAGAGCTTAGTACAGGAAATTGAAGGAGGATTACAAGTTTCA TCCTTGCAGATGGATGGAACACTATCTTTTAGATCTAAAACTGATCAGGTGCTGAGTTGCTATCCCTTCAAAAATCTCCGTACAGCTGCTGACTTACTCT TTTTACATGGAAGTTCTGATACAGTGATTGCTAAACAAGCAATTTTTCTGTATTATTTGTATGATCGCCACTGGACAATTCCTGATGAACAATGGAGACA TATAGTAGAGGACTTTGCAGCTACCTTTAGCATTAGCAGGCACTCGTTACTTGAGTCTTTAACTTTTTACCTTCTGGATGATCACACAGAAGAAGCTTTA CAGGAAGCTTGTCGCCTTCTTCCTGAGATGTCTGGTCCAGTATCACATCCCAAAATTGCTGAAGTACTGTTAGAAAGGGGTAGCCCTGATACAGCTCTTA TGGTTTTAAGGTGGACTGGGCGTGATAGTGGACCACACATGATTTCACTCAGAGATGCTGTCACTGCAGTGCGGGTGAGGGTTGAATGTGGGCTTCTGAC TGAAGCATTTATGCATCAGAGAGTTCTCTGGACCAGAGTGAAGGAAAAACATTTGAATAAAGGGGCATTTGGGGGTACTTCCGACAAACTAAAAGACCAA TGTAGTAATTGGGTGGAGTGGGTGGAGGCCTTAGTGACTGAGATTTGCTGCCTCTGTATTAGGAGGAACTTGGCTGATCGAATGCTAGAATTGCCATGGA ATTCTGACGAAGAGATATATATACACAAGTGTCTTTTGGATTACGCCATTGAAGACCCCCGGAGGACTACCGGAAGTCTTCTTGTTGTGTTTTACATTCA GCGCTACAGATACTCTGAAGCATACCAAGTTCATGTTAGACTTGAAAAGATAGAACAAGACACCATTTCAAAAGGTTCTATAAGTGAAGAATTTCTACCA AGATTAGAAACGGCTGTTCGGTGGAGAGCGAATTTGGTTAATAGATGCTTGGAGTTGTTGCCAGATATTGAGCAGCAAAAAGTGAGAAGCGGGATCTTGA CTGAGGACGCTGGTACATTTCATGAAGAAATTGAAATCCCTGCTAAATTTGATGTTCCTCCGATTCATGATTCCAGATCCACCAGTTTATTGATTCCCTC TTCTGCAAATTCTTCATCCCTGCTGCAGAATAATCATACAAATGGTTTGTTGAGTTCATCAACTTTAGGAACTTCAACCAAATTAGGCATATCTTTCCCC ACTACCGGCCCTGAGCTTGGTAATATTCGTTCGCCATCTTATCACCATGAGGGCTTAATTACCAGTAACGAGAGGGTTCCAAATAACCGTGGCAAAATTG GAAAAATCCTTAGATATGATAACACTCCAACTCCAAGGAGTCGTAAGATCCGTCTCATGAATGATTCACCTCTAAAGGGAGTTAACAGAACATCACCTAG CAGTTTCCAGGAAAATAAAGTGGATAAAATTTTGCCAGGAGTTGAACAGAATTTGTTTTCTGGTTTTTATCAAAGTACTCCACATCCTCCTACTTACTCT GGGATGGCTATAGCTAATCCTGATACTCGATCTGGGCGCAGCTCTTCAAAAGAATTTGCAAATGACCTCCCAAATATGTCAAGCTGGAATGTCCAAGCAC ACACAAATGATAGAAGTTGGAATGTAGAGTCTATTAATGATCCAATGGAGGTTTCTCTGAGCCACATGGAGAAGAAATTAGACATTGGAGAAAACATCAA TGGTGGACCTCGTTGGAGATCTGATGAAACTAGTGACGAGGACGAGGAACAGGGCCTGGAAAAGGCTATGGATAAAGCCCATCATGCAACTCCAACTAGG ACAACCAGAAGAAGCAGATTTGCCATGAGATGAAAGCACAACCTTTTTTCACTAAAGAATTCTGGAAAATTTATGAAAAGAATATGATGAGTGTACTAGT TAAACAATGTGTTTTGAGGATGAGAGATGTGCCCTTTTGGAATTTCGAGTTTTTTCTCATGCATGTACTTGATCTTAGTTGTGCAGCTAAATCATTGAGG GAAATGTTAATTTTATACTCATTTTTTATGAATAAAATATAAATAAAAAGCCCACCCTAATACCTGAGTAAAACTCTTCATTTATCTAATTAAGCTGGCT TTAGCATGAGCAGTAATAAAATGCATGTATTAGCA BLAST
Tissuepods
Gene nameLI_gene_176601; 
Additional informationdetails; 

Expression of Ll_transcript_488882

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_488882
BlastpE3 ubiquitin-protein ligase HOS1 from Arabidopsis with 50% of identity
BlastxE3 ubiquitin-protein ligase HOS1 from Arabidopsis with 49.73% of identity
Eggnoge3 ubiquitin-protein ligase(ENOG4110YTD)
KeggLink to kegg annotations (AT2G39810)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019421505.1)
PfamNuclear pore complex assembly (PF13934.5)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;