Id Trinity | TRINITY_DN50352_c1_g1_i4 |
---|---|
Name Transcript | Ll_transcript_489774 |
Sequence | AAGTCAATTAAATTCGAATCGAATTTCAAACTATCATATTTTGAATTAAATTGAAACAGATAAAGAAATCACTGTTGCGTCATTCTCTACCATCAACCTC CGTCGTGTGACGTAATCCTCCGGCCACAGCAACGCAACGCTGCGTTTAATGAATCAATTATCATTATCAACGAGACTCGCATAAACCCCACTACTACTTG ATCAAGGCTCAAAGAGATTTCAGAGAATGTTGTTACGAAGAAGGTGCTGCTGGATAGCTCTATTATTGATTGCAGCAACTACTGTTGGATCTGCTCTGTG CAGTGTTAATCCTCATCGCATTCTTTTAGATACAGATGTTGGCACTGATGACTTATTTGCACTTCTCTACCTTTTGAAGCTCAATACATCACAATTTCAA TTGGAGGCAGTGACGATCAATGCAAATACTTGGACAAGTGCGGGCCATGCTGTGAATCAAATTTATGACATACTTTACATGATGGGAAGAGATGATGTTG CTGTTGGTATTGGAGGTGAAGGTGGAATACTTCCAAATGGTACCATACTCCCTAATGTGGGTGGATATCTTCCAATCATAGAACAGGGTATGACAACAGC AGGAAATTGCAGATACAGACGTGCCATTCCTGTAGGTCTTGGAGGGCGCTTAGATGTGGTACCAAATTGGCCTTGCCGAAGTTTCTTGCCAAGGAGATAA TGATCTCTTAGCCTTGGAGTTCGATATGGCAACACAGCAGTGCATTTTGAAGAAGATTTTGATGCAAAATTAGTCTTCTGCTTCTCAACGTTCAATGTGA AATGATGCCAAAAATTAAATGGGTATGATCTGAAGAGATTAAAGTTTGTTTCTTTACCCTTTTTTCGCTCCCTTTTTCTATAGGAATATGCAAAATTCTC AAAGGGTTGTTTTTCTTGTAAGTGTTTTGCTATATTAGTGAAGAATTGGCACCATTTATTTTGCTTTTACCAATTGTGAATGGTAACATTATTATTTGAT TGGATAGGTTATTTGATATTCAGTATGGTTCTTCATTGTGGTGTTAACTTCCATGATTGAGAAGGAAAGTAAGGTTGAGATGAGAAACAGGTTATTGTAT TGGTTGGTTAACAAAGGAAATGCCTAGACAAAATAGCATATCACAATATGCTTGTCCCACATTGGGCATTACAAAAGATGATACTAGGTTTGTAATATAA ATTGTTAATAAGTGTGGTGAAACTGAGCAAGAAAGCAAGAGTCTCAGGCTTCTGTAGCCTTTGATGCATTTCGTGTTTTCCTCCTGCAGGAG BLAST |
Tissue | pods |
Gene name | LI_gene_176610; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_489774
Blastp | - |
---|---|
Blastx | Calcium-dependent protein kinase 4 from Arabidopsis with 89.29% of identity |
Eggnog | - |
Kegg | - |
CantataDB | Link to cantataDB annotations (CNT0000691) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019462539.1) |
Pfam | Inosine-uridine preferring nucleoside hydrolase (PF01156.18) |
Rfam | - |
GO | - |