Ll_transcript_490326

• Id Trinity: TRINITY_DN50355_c0_g2_i12
• Name Transcript: Ll_transcript_490326
• Sequence: GCCAGGTCGGCGCAGCACAACACGTAAAGGCAGAGAGAGAAAAAAAGTACCTGAATTAATTATTTAAACTTTAACTAAGCTATAAACAATGATAGGATAT TCCATTATATAATCATAATTAGTTGTAGTGCATAAAGAAAAAAAATATCCATGTAATAATAACACACAACCCATTAACAACAATAATCAATTATCCCGAT TCTTGTTAAAAGCGATTCTGAACCGAGATCTTTAACTACGCCCTCACTTGTCACTTGTTACTTGCACAATCGTGTTTTTTCATTTCAGGGGAAAGAAGCA TGAGTTGTTTCAGCTGTTGCGAAGATGATGAATACCACAAGGCTGCTGAGAGTGGAGGACCATACATCGTGAAAAATGCACCAGTTATAAATTCTGGTGT AGGAAATGATGGAAATTATCATGCTTCTGAAAGTGCAAAGCAAGGTGCTCAGACTGTTAAAGTCCAGCCCATTGAAGTTCCTTCTATACCAGTTGATGAA CTAAAAGAGGTTACAGATAACTTTGGGCAAGATTCTCTGATTGGAGAGGGATCCTATGGAAGAGTATATTATGGCATTCTTAAAAGCGAGCAGGCCGCAG CAATCAAGAAGTTAGATTCCAGTAAACAACCCGACCAGGAATTTTTAGCACAGGTTTCAATGGTATCAAGGCTGAAACATGACAATTTTGTTCAGTTGCT GGGTTACTGTATTGATGGAAACTCCCGTATTCTTGCTTATGAGTTTGCATCTAATGGTTCACTTCATGATATTTTACACGGCAGAAAAGGTGTTAAAGGA GCACAGCCTGGTCCTGTTTTGACATGGGCACAGAGAGTAAAAATTGCTGTAGGGGCTGCCAGAGGGCTTGAATATTTGCATGAGAAGGCTGACCCCCACA TTATCCACCGAGATATCAAGTCAAGCAATGTACTAATCTTTGATGATGATGTTGCTAAAATTGCAGACTTTGATTTGTCAAATCAGGCTCCTGACATGGC TGCGCGTCTTCATTCCACTCGTGTACTTGGAACCTTTGGTTATCATGCACCAGAGTAAGATATGGAAATCAAATTTCAAGTTACACATAAGATCACATGC TTTATTTTATCCGTATTGGATATCATTAGCCCCTTGAATTAGTGTATAAACACTGAAGAATTATTGGAATAGCCATATAAAATTTCCTTTTTGCCATAGT TGACTAGACAAGCATCACCAATTCCCATACTTTTAGTTTGTGTTTGTTTATCTAATTTAAGTCAGTATCAATTTGGGGAAATAAATTTGTTTTCCTATAT TTAGTGGCACAGCCTCAATCTGTCTAACCTTGTGGATGCAGATATGCAATGACTGGACAATTGAATGCTAAGAGTGATGTATACAGTTTCGGTGTTGTTC TTCTGGAACTTTTGACTGGAAGGAAACCCGTTGATCATACACTGCCACGTGGACAGCAGAGTCTGGTTACTTGGGTACTAACTTAAGCTATATTTTTTCA TCCCCTCTCCCAAAATATAAAACAGAATCCACATTTCTGTTGAGATTTGCTGTCCTCCTGTCATGAAATTTAGAATGTAGTGTAAGTGCTCATCACAGCA ATGATAATTTGATTTGTTTTTCAGGCTACACCAAGACTCAGTGAGGATAAAGTCAGGCAGTGTGTTGATACAAGACTAGGAGGAGAATACCCACCCAAAG CTGTTGCTAAGGTGTGTTGTTTTTTCAGTATATTGTTCTTATTTTAATTTTATAATGCCATTTTCCTTGCTAAGGTGTTGAGGAGTGTGGACTGTTTGTG GAAGTGTTTTATAGGTTATATTTATTTTAAATATATGCTTGAATTGGAAAAGTATGCAAATGCAGAAATCTAGAGAAAGATAGAATTCTTATATTTTGTT TAGGTTGTAAATGTTATTCAAGAGACCAAAGTTTGAAAGTAAACTTTTGTATCATTTCCATTAGGGGAAATTTGGTTGGGCAATTGAAAGACAATGTTTT TCTCTCTATAATTTATATTCTCAGTTCTAGTATGAAATTAGAGCGCCATTACAGGTATGAATTGCATTAGAGGAAAATATACAAATACATCACTGTAGAT GTAGTATTTACATTTCTATTGGGACCTTTATAGGAAACACTACTGCCCTTCAAGATAAACTATTTACATGATTTTACAGATGGCTGCTGTTGCTGCACTG TGCGTGCAATATGAAGCCGATTTCAGACCAAATATGAGCATTGTAGTCAAAGCTCTTCAACCTTTGTTGACTGCACGACTTGGACCAGCTGGTGAAACAC CAAATTAACCACTCTCTGCATTTCTTTCTCTCCCTGTATCTATCTCTCTATGTCTGTGAGTAGTATGTGCACAAGTTTACATTCAAAAATATGAGAGACC GCTTCAGAAGCTGGTGGTAAATTTGCTTGAACATGGCTTTATGGCCCATTGTATACTCTGCATTCATTTTGTTCATAATCAATGATGTTCTTTTAGGTTT CTTTGCTGCTTCTATTCTTTTAAATGTTTATTTTTTCTTCTCGGTTTTCTTTCATTTCTACCTCTTATAATCTTATTGTTGGGACGGTTGCCATTTTTAC TTGAAAGTGTTGGGAAAAACTGCAAACTGAAAATGAGTATACTCAGCAAAGAACATGTCACTGGACTATTTCTTTATTGGAAACAGTTATAATGACAAAG GCATGTTCTCGCTAGATTATTTTTTTATTAATTTTTTTTAAATCTAGATGAGAGTGTATACTTGTATAATTATTAATGATTTCAATTCCATTGTTTTGGA AATTATGATTTCAATTCCTTTAAAGTTTTTTATCTTATGAAGTTAAC
• Tissue: pods
• Gene name: LI_gene_176631;
• Additional information: details;

Expression of Ll_transcript_490326

FPKM

• PAB: 0.4
• PNAB: 0.2
• PS1: 0.8
• PS2: 0.2
• PS3: 0.1
• PW1: 1.8
• PW2: 0.9
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_490326

• Blastp: Pto-interacting protein 1 from Lycopersicon with 76.98% of identity
• Blastx: Pto-interacting protein 1 from Lycopersicon with 71.12% of identity
• Eggnog: Serine Threonine protein kinase(COG0515)
• Kegg: Link to kegg annotations (544006)
• CantataDB: Link to cantataDB annotations (CNT0002382)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019453213.1)
• Pfam: Protein kinase domain (PF00069.24)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;