| Id Trinity | TRINITY_DN50355_c0_g2_i16 |
|---|---|
| Name Transcript | Ll_transcript_490330 |
| Sequence | CTAAAAAAGTAGCAGAATTAATATTTTATAATATTTACTTCAACATAAATTATAACGGGGGATATTTATTCCATTACATAATGAATTAGTCGGTAGTGGA AGTAAAAATAAATCACATTCAATAATTCCGATTCCTGTTCAAACAAGTCAAGAACTTCCTCTCTGCTTTCGGAACCGAGATCTTCAACTACGCCTTCACT TCTCATTTGTATAATCTTGCTTTTCCATTTCACCTGCTCTTCGATCTATCACACTCTTAATTTTCACTCTCACTTATTTTTCTTTTCTTTTTGCATGAAA TTATGTCTGTTATTTTCATTTTCATGATACAATTATAGTTATTTCTCTGCGTAGACTCGTCAATCTCTCCTTACTTGGATTTTAGTAGTACTTTGCTCTC GTTAACGGAAACGGACTCGATCCACTTTCATTTAGCTTTACTATTTTCAGATTTCATAACTTAAGAAAGGTGGGCCCAGTGCACAGGGCCTCGGTCGTCT TCTCGATGATAAGTAGAGAGAGTGTTTACAGGATTTGAACTCGTGAACTCGTGGTCACTAAGCTATAATTTTTCTATTGCGGAAACAATGGTATTGTTAC TTGCCATAGTTTGTTGCTTGTTCAAGGATGATGAGGTTATGCAAATAATCTAGATGATATAGTTGTTTTTTAGTAATAAAAATTTAGGTGAGTTGGATCC TGAGCTCACGACATGCGTCATGGCTCGGAAAGGATTGAAAGTCGCATCCTTGTGGAGGATGAGCTGATACTTACAAAATGGACCAACATTTCTTGCCAAT GGCATTTTGTTATCTCCTTTTAATAATTGATAACATTTGACACACTGACATCTTGATAAGTGGAACCAAAATGTTTTATCTTTTTATCTCACAGAGTTTG TTGTATTTATGAAATACACCTAACATAGAACAAAACTTGTGTGTTTTCGACATGTCCATTAAATTATAAGAGCCACTGTGAATCAACGAGTAGTAGCACC ATCCATGTTCGAGTTATTGTATCATACAGATGCAATGATGATTTAGTTACTGGTTTAAAATCCTTCATTCTTTCTTTCTCTTGAGTTGTTAAAAGTTGCA ATAATTACCAGGATGTATTTATTTTCTAGCAATGAACATCTCATGGAAGTGGTAATGCTTGATTGTTAAAATTATTTGGACTTTGTATTCAATCTTAAAA GAACTATGTTATAAGTATCATCTGATTGACTTATGAATTTTATCAGTGGAAGGAAGCATGAGTTGTTTCAACTGTTGTGAAGAGGATGAATACAACAAGG CTGCTGAAAGTGGAGGACCATATGTCGTGAAAAATGCAGCAGGAAATGATGGGAATTATCATGCTTCTGAAACTGCAAAGCAGGGTGCTCAGACTGTTAA AGTCCAGCCCATTGAAGTTCCTTCTATACCAGCAGATGAACTAAAAGAAGTTACAGATAACTTTGGGCAAGATTCTCTGATTGGAGAGGGATCCTATGGA AGAGTATATTATGGTATTCTTAAAAGTGGGCAGGCCGCAGCAATTAAGAAATTAGATTCAAGTAAACAGCCGGACCAGGAATTTTTAGCACAGGTTTCAA TGGTATCAAGGCTGAAACATGAAAATTTTGTCCAGTTGCTGGGTTACTGTGTTGATGGAAACTCTCGTATTCTTGCTTATGAGTTTGCGTCTAATGGATC TCTCCATGATATTTTACATGGTATATGGTTGAATGAGAAATATACTAACGTCTATAACAGAATTGAAATCTTTTTATGTTATAGGAACTAAGAATATTGT GGATTTTAACATGATTTTTTTCTCCTTTCTGGTGCTTTGTAGGCAATGGATTTTAACATTGATTATTTTACAATCATGTTCTCATCATTGCCACTTTATG TGTAGGCAGAAAAGGTGTTAAAGGAGCACAACCTGGCCCTGTTTTAACATGGGCACAGAGAGTAAAAATTGCTGTAGGTGCTGCAAGAGGGCTTGAATAC TTGCATGAGAAAGCTGATCCCCACATTATTCACCGGGATATCAAGTCAAGCAATGTACTAATCTTTGAAGATGATGTTGCTAAAATTGCAGATTTTGATT TGTCAAATCAGGCTCCTGACATGGCTGCACGTCTTCATTCCACTCGTGTACTCGGAACCTTTGGTTATCATGCACCAGAATATGCAATGACTGGACAATT GAATGCTAAGAGTGATGTATACAGTTTTGGTGTCGTTCTTCTGGAACTTTTGACTGGAAGGAAACCTGTTGATCACACACTACCACGTGGACAACAGAGT CTGGTTACTTGGGCTACACCAAGACTCAGTGAGGATAAAGTCAGGCAGTGTGTTGATACAAGACTAGGAGGAGAATACCCACCCAAAGCTGTTGCTAAGG TGTGTTGTTTTTTCAGTATATTGTTCTTATTTTAATTTTATAATGCCATTTTCCTTGCTAAGGTGTTGAGGAGTGTGGACTGTTTGTGGAAGTGTTTTAT AGGTTATATTTATTTTAAATATATGCTTGAATTGGAAAAGTATGCAAATGCAGAAATCTAGAGAAAGATAGAATTCTTATATTTTGTTTAGGTTGTAAAT GTTATTCAAGAGACCAAAGTTTGAAAGTAAACTTTTGTATCATTTCCATTAGGGGAAATTTGGTTGGGCAATTGAAAGACAATGTTTTTCTCTCTATAAT TTATATTCTCAGTTCTAGTATGAAATTAGAGCGCCATTACAGGTATGAATTGCATTAGAGGAAAATATACAAATACATCACTGTAGATGTAGTATTTACA TTTCTATTGGGACCTTTATAGGAAACACTACTGCCCTTCAAGATAAACTATTTACATGATTTTACAGATGGCTGCTGTTGCTGCACTGTGCGTGCAATAT GAAGCCGATTTCAGACCAAATATGAGCATTGTAGTCAAAGCTCTTCAACCTTTGTTGACTGCACGACTTGGACCAGCTGGTGAAACACCAAATTAACCAC TCTCTGCATTTCTTTCTCTCCCTGTATCTATCTCTCTATGTCTGTGAGTAGTATGTGCACAAGTTTACATTCAAAAATATGAGAGACCGCTTCAGAAGCT GGTGGTAAATTTGCTTGAACATGGCTTTATGGCCCATTGTATACTCTGCATTCATTTTGTTCATAATCAATGATGTTCTTTTAGGTTTCTTTGCTGCTTC TATTCTTTTAAATGTTTATTTTTTCTTCTCGGTTTTCTTTCATTTCTACCTCTTATAATCTTATTGTTGGGACGGTTGCCATTTTTACTTGAAAGTGTTG GGAAAAACTGCAAACTGAAAATGAGTATACTCAGCAAAGAACATGTCACTGGACTATTTCTTTATTGGAAACAGTTATAATGACAAAGGCATGTTCTCGC TAGATTATTTTTTTATTAATTTTTTTTAAATCTAGATGAGAGTGTATACTTGTATAATTATTAATGATTTCAATTCCATTGTTTTGGAAATTATGATTTC AATTCCTTTAAAGTTTTTTATCTTATGAAGTTAAC BLAST |
| Tissue | pods |
| Gene name | LI_gene_176631; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_490330
| Blastp | Pto-interacting protein 1 from Lycopersicon with 69.03% of identity |
|---|---|
| Blastx | Probable receptor-like protein kinase At2g47060 from Arabidopsis with 94.38% of identity |
| Eggnog | Serine Threonine protein kinase(COG0515) |
| Kegg | Link to kegg annotations (544006) |
| CantataDB | Link to cantataDB annotations (CNT0002382) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_020226559.1) |
| Pfam | Protein kinase domain (PF00069.24) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |