Id Trinity | TRINITY_DN50355_c0_g2_i23 |
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Name Transcript | Ll_transcript_490342 |
Sequence | GCCAGGTCGGCGCAGCACAACACGTAAAGGCAGAGAGAGAAAAAAAGTACCTGAATTAATTATTTAAACTTTAACTAAGCTATAAACAATGATAGGATAT TCCATTATATAATCATAATTAGTTGTAGTGCATAAAGAAAAAAAATATCCATGTAATAATAACACACAACCCATTAACAACAATAATCAATTATCCCGAT TCTTGTTAAAAGCGATTCTGAACCGAGATCTTTAACTACGCCCTCACTTGTCACTTGTTACTTGCACAATCGTGTTTTTTCATTTCAGGGGAAAGAAGCA TGAGTTGTTTCAGCTGTTGCGAAGATGATGAATACCACAAGGCTGCTGAGAGTGGAGGACCATACATCGTGAAAAATGCACCAGGAAATGATGGAAATTA TCATGCTTCTGAAAGTGCAAAGCAAGGTGCTCAGACTGTTAAAGTCCAGCCCATTGAAGTTCCTTCTATACCAGTTGATGAACTAAAAGAGGTTACAGAT AACTTTGGGCAAGATTCTCTGATTGGAGAGGGATCCTATGGAAGAGTATATTATGGCATTCTTAAAAGCGAGCAGGCCGCAGCAATCAAGAAGTTAGATT CCAGTAAACAACCCGACCAGGAATTTTTAGCACAGGTTTCAATGGTATCAAGGCTGAAACATGACAATTTTGTTCAGTTGCTGGGTTACTGTATTGATGG AAACTCCCGTATTCTTGCTTATGAGTTTGCATCTAATGGTTCACTTCATGATATTTTACACGGCAGAAAAGGTGTTAAAGGAGCACAGCCTGGTCCTGTT TTGACATGGGCACAGAGAGTAAAAATTGCTGTAGGGGCTGCCAGAGGGCTTGAATATTTGCATGAGAAGGCTGACCCCCACATTATCCACCGAGATATCA AGTCAAGCAATGTACTAATCTTTGATGATGATGTTGCTAAAATTGCAGACTTTGATTTGTCAAATCAGGCTCCTGACATGGCTGCGCGTCTTCATTCCAC TCGTGTACTTGGAACCTTTGGTTATCATGCACCAGAGTAAGATATGGAAATCAAATTTCAAGTTACACATAAGATCACATGCTTTATTTTATCCGTATTG GATATCATTAGCCCCTTGAATTAGTGTATAAACACTGAAGAATTATTGGAATAGCCATATAAAATTTCCTTTTTGCCATAGTTGACTAGACAAGCATCAC CAATTCCCATACTTTTAGTTTGTGTTTGTTTATCTAATTTAAGTCAGTATCAATTTGGGGAAATAAATTTGTTTTCCTATATTTAGTGGCACAGCCTCAA TCTGTCTAACCTTGTGGATGCAGATATGCAATGACTGGACAATTGAATGCTAAGAGTGATGTATACAGTTTCGGTGTTGTTCTTCTGGAACTTTTGACTG GAAGGAAACCCGTTGATCATACACTGCCACGTGGACAGCAGAGTCTGGTTACTTGGGCTACACCAAGACTCAGTGAGGATAAAGTCAGGCAGTGTGTTGA TACAAGACTAGGAGGAGAATACCCACCCAAAGCTGTTGCTAAGATGGCTGCTGTTGCTGCACTGTGCGTGCAATATGAAGCCGATTTCAGACCAAATATG AGCATTGTAGTCAAAGCTCTTCAACCTTTGTTGACTGCACGACTTGGACCAGCTGGTGAAACACCAAATTAACCACTCTCTGCATTTCTTTCTCTCCCTG TATCTATCTCTCTATGTCTGTGAGTAGTATGTGCACAAGTTTACATTCAAAAATATGAGAGACCGCTTCAGAAGCTGGTGGTAAATTTGCTTGAACATGG CTTTATGGCCCATTGTATACTCTGCATTCATTTTGTTCATAATCAATGATGTTCTTTTAGGTTTCTTTGCTGCTTCTATTCTTTTAAATGTTTATTTTTT CTTCTCGGTTTTCTTTCATTTCTACCTCTTATAATCTTATTGTTGGGACGGTTGCCATTTTTACTTGAAAGTGTTGGGAAAAACTGCAAACTGAAAATGA GTATACTCAGCAAAGAACATGTCACTGGACTATTTCTTTATTGGAAACAGTTATAATGACAAAGGCATGTTCTCGCTAGATTATTTTTTTATTAATTTTT TTTAAATCTAGATGAGAGTGTATACTTGTATAATTATTAATGATTTCAATTCCATTGTTTTGGAAATTATGATTTCAATTCCTTTAAAGTTTTTTATCTT ATGAAGTTAAC BLAST |
Tissue | pods |
Gene name | LI_gene_176631; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_490342
Blastp | Pto-interacting protein 1 from Lycopersicon with 78.86% of identity |
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Blastx | Pto-interacting protein 1 from Lycopersicon with 72.69% of identity |
Eggnog | Serine Threonine protein kinase(COG0515) |
Kegg | Link to kegg annotations (544006) |
CantataDB | Link to cantataDB annotations (CNT0002382) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019453214.1) |
Pfam | Protein kinase domain (PF00069.24) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |