Ll_transcript_488456

• Id Trinity: TRINITY_DN50357_c0_g3_i10
• Name Transcript: Ll_transcript_488456
• Sequence: GAACCCCTTGAGTCGCATAATAAATAAAACCTCCACAATATTCCTAAAAAAACCATTTTTGTTCCATTTATGGATAAAATATGTACCAGAAAAAAAGAAA AACTTTGGGAAGTGCTTCGCATATACGTTCAGGCTTCTGCAATTTTGACTTCAAACCCTAAGCCATAATCGTAGAACCCTTAAAAACCCTGCTTCGTCGT CAATTAAGGTTTTGAGTAGTTAGGGACATGTCATCTTCAGACGAAGAGGATGAGGCTCAGCCGCTGTCTGTGTTAAATTACTATTTTGAAGATGACGAAG ATGAACCTGTATCATTTTCTGTGTTGCCCATTCAATGGAATGAGTCTGAGAGTTCGGTTGGCAAGAAAAAGCAATTGTTCCTGCGTGGTGTTGCTGATGA TGGGCTGAGGAAAATTTTCATGGAAGTTGTAGCATGGAGATTTGATCTCTCCTATGTGAAGCCTGATATATCGGTGCTACCGAAGAATAAGAAATGGATC AAACTTGAGAAGCCAAGGAAGAGCTATGAGGATACCATTAGGACTATTTTAATCACCATTCACTTCCTGAGTCATGTAAAGAGGTATCCTGACACATCTG CCAAATCTCTGTGGGACAACTTGAGTAGGAATAAGGTGTTCAGCTCTTATGAAGTTATGCCTTCGCACAATGATTTATTAAACCATAAGGCTTTAATGGG TGAAGCTGCCAAAAGGGATGCTGTCTTAGCCAAGTCCAAGCTTTTGCACATGGTTCTGGAAGATAAGTTGGGGTCTAAGAAATTTTCTGATGAGGAAGCT AAAGATTTGGCTCGACCTGGATTTATAATAGATGATATTGAAAATGATATGAATGATGAAATTGCGGAAGAGTCGGATGAAGAGGATGAGTTGTTTGACT CTGTTTGTGCAATTTGTGACAATGGCGGTAATCTTTTATGTTGTGATGGGAAATGCATGAGGTCATTTCATGCTGTTAAGGAGGATGGTGAAGAATCTTC TTGTGAATCTCTTGGTTTTAGTAAGAAGAAAGTTAATGAGATCCAGAACTTTTATTGTGAGAATTGTAAATATAATCAGCACCAGTGCTTTGCATGTGGC AAACTAGGCTGTTCGGATAAAATTTCGGGTGCTGAGGTGTTCAAATGTGCTTCTGCGACATGTGGCCTCTTTTATCATCCACGCTGTGTTGCAAAGTTAA TACAGGATGTCGTTGAGGATGCTCCAAAGGAACTTGAGAGAAATATTGCTCAGGGGGTACCTTTTACTTGTCCTACTCACTATTGCCATTTCTGTAAAGA AATGGAAGACAAGAAGAAACGCGAGTTGCAGTTTGCTGTTTGCAGGCGTTGTCCCATATCTTATCATCGCAAATGTTTGCCAAGAGATATCACTTTGGAT GGCGTAGATGATGAAGATATTATAACAAGGGCTTGGGAAGGTCTTCTGCCAAACAATCGGATTCTTATATATTGCTTAGAACATGAGATTGATGATGATC TTGAGACACCGTTAAGAGATCATATAAAATTTCCGGGTTTTAAAGCTACCGTTGGAGAAATTAATAATGAGAAGACAAAGCCTGCTACCAAAGAGAGAGT TGCATTGAAAAAGAACAATGTAGACTTAGATAATTCTTTTGGCAGAAGAACTGCTGATAAAGTTTTAAAACTGCCTCCAAAAATGTCATCTAAGAAAGAA GGTATCATGAAGGATGCAAAGATTTCTGAATCCAACATCCCAAGGAAACCAAAAACAAATGAAGGATCAAAAAGGTGGTCGAATGAAAATAAGAGGTCAA TCTCAAAAGGAACTGAAAGGCCTGTTTGTGATGAAAAAATGCCTTCATTGGGTGAGAAATTATACGGTGCTTTCTTTCAGAAGGATTCTGAGCAAATAAA TTCTGGCAATGTGAAGATTGCTAATGCGGCTAAGAAAAAGACGTATGGTGCATCACCTGCTTTAGATGCGGATTCAGAACGGAGATTGATGGCTTTGTTT AAAGATGCTATGTCAACAATTACTTTGGAGAATGTTGTAAAAGACCATAAGTTTTCTTCTACTCATACTTCCTCGTTCAGAAGTGTTGTGGAGAAGACTA TTACAGTAGGGAGGTTGGAAGGGTCAGTTGAGGCTGTTCGAACAGCTCTAAAGATGCTAGAAAATGGGCGCAGCATTCGGGATGCAGAAGCTGTTTGTGG CCCTGATGTTCTTAACCAGATATTTAAGTGGAAGGACAAACTGAGAGTATATCTTGCGCCGGTTCTATATGGTAATCGGTACACCTCGTATGGTCGCCAC TTTACACAAGTGGAAAAGCTGGAAGGGATTGTGGATAAACTCCATTGGTATGTTCAGAATGGTGATACTATTGTGGACTTCTGTTGTGGTGCTAATGATT TTAGCATCCTTATGAAGAAAAAGCTGGAAGAGACTGGGAAGAATTGCTTGTACAGGAACTATGATTTACTTCCAACAAAGAATGATTTTAATTTTGAGAT GAGAGATTGGACGACTGTCCAGCCAAAGGAGTTGCCTAAAGGGTCACAATTGATCATGGGCCTCAATCCCCCTTTTGGGCTTAAAGCAGCTTTGGCTAAC AAGTTTATAGATAAGGCACTCGAGTTTAAACCGAAGCTCCTGATTCTGATAGTACCACAGGAGACAGAGAGGCTAGATAAAAAGCGGTCACCTTATGATC TTGTGTGGGAGGATAACAGGTTTCTATCAGGCAAGTCATTCTACCTGCCTGGATCTGTTGACGCTAATGACAAACAAATGGAGCAATGGAATGTAAGGCC ACCCCCACTATCCCTTTGGAGCCATCCTGACTGGATTGATGCACACAAGGCCATAGCTCAGAAGCATGGTCACCTGTTGAGCCAGCGTGAAACATTACAA ATGGAAAGCCTTAATAATGAAAGGTTACCTGCCAGTGATGCAATGGGTGATGTTGATAATCTCTCACTGGGTAATGATCTCAAGAGTAAAAAAGATCAAG CATCTATGAATGAAGGCCAAAAAGTAAGCTCGTTTCTTGGAAATGTTGGCCGACAGAGTCAAGAGAGACAGGAATGTGGGATGAGCAAGGCTGAGAGTAC CTCTCGGAAGAGGAAACAAACCGAGGAAAGAGATAGAAGAGAACCAGGTGTGACCTTACCAGCTAGAAGGCAGGTTGTAAATCAAATACCTGAGAGTCCA TCCAATCCAATTAATGGGAGATCCTCAGCTGAAGGTTTTCAGCCCAAATCTGTTATGTCACCATATTTTGAGGTTGGTGATCATGGTCATGGGCATTTGG GGCCCATTTCTAGCTCAGATATGGAGTTTGGAGCAGCCTATCGTGAAACCCGTAATTGGCCAAGTGTTGCCAATCCCCTTTCTGGTATAGAAGAACACCA TGGCAGCCTCCGAGGAGACAGCACTGGTAGCCGTGGATATAGGAATGATGGGGGGCAGTACCTGAGTGAATTAGAGACAAGCCAATGGACTCCTCACTAT GGGCATCAGGATCATCCGCATTCTATATCAGCTATGAGGAATAATTTTCTATCTGGTCATGATGCTGCTCATGACCACATGAGACCTAGTTATGGGGGAT TTGGTTCAGTGTCTGACTCTTACATGATGAATACACCAGCTATGCAGCGATATGCACCACGCTTGGATGAATTAAACCATGCCGGGATGAATTCTTTGGG GTCTGGACCTCCTATAGTTGGTAGAAATGGTACTTTTGCAGGCAGTGTGCCCCAACCTGGATTTCGAAGTGGGACTTTTGCACCAGGTCCCAACCATGCA TATTCACGCCAGAATTCGGCAGGTTGGTTCGATGAGTAACTAGAATGTCCATCCTTTAGGTTTACTTTTTTCTTTGCGCATTAAGATGCTACTTGCTGCA AATAGTTGTTATTAAGATGGGAGCCCTCTTACAATCTTCAGAAGTCTTAGCTTGCTATGCTACCCTTGCATTTGTTCTGTTCCCATTAAGCATTTTTCTT TTGGGGTTTTCTACGACCTTTATAATATTTGTATATGTAGGTCCCCATAGTCGACCTGTTTGGTGTATGTGCATAAAAAAAAACTAAACCAACTTTGTTA AAGATTTTGTACTAACCAAGTCTATGAGATGGTCAATGTAGAACGTGTTCTACCTTTGCATCTGCCATTCTCGAGGAATATTGTAGATGCTTCATTTTAA CCTATAAATTTTATAAAATCTTACCAAACATAAGCATACTATTTTAACCAATGCTCAAGTAAACTACAACAAAGTAATACTCCAAAAGTAAAGTTAACAA TACCCAAGTGTTTATAAAAATATAAATATCCCAAGTTGCTTCCTTCATGTGCCATGTTGAACAAAGTGTCTTCCTTTGGGAACATGCAATTTATCCATGT AATGAGTTTTTTCATTTAAATTTGGGACTAGGGATGTCTTTATTCTCCTTGAAAATAAGGTTGTGAACATAACACATAAGCCTCACTTTGCCCGTTATTA AGTGTTGGCCTATGAATATAACACATAAGTCTTTATGCAGGTTGAATATAAAAAAAAATGAAAGAACATATGGTTGTTTATAGAATTTAGGAATTTGTAC GAAGAATTAAAATTCGAAGGAGTAAGGTGTAGAGATTGAGAAATGAATCTGAGCTTCTTATTAGAAATCAAAGTTGGAATGGAATTGAAAGAATACAAGA AGATTTTAT
• Tissue: pods
• Gene name: LI_gene_176648;
• Additional information: details;

Expression of Ll_transcript_488456

FPKM

• PAB: 1
• PNAB: 9.7
• PS1: 18.7
• PS2: 13.2
• PS3: 18.9
• PW1: 9.5
• PW2: 10.2
• PW3: 7.9

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_488456

• Blastp: Protein ENHANCED DOWNY MILDEW 2 from Arabidopsis with 49.58% of identity
• Blastx: Protein ENHANCED DOWNY MILDEW 2 from Arabidopsis with 49.58% of identity
• Eggnog: NA(ENOG410YE57)
• Kegg: Link to kegg annotations (AT5G55390)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019440998.1)
• Pfam: Cytosine specific DNA methyltransferase replication foci domain (PF12047.7)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;