| Id Trinity | TRINITY_DN50359_c0_g1_i11 |
|---|---|
| Name Transcript | Ll_transcript_489719 |
| Sequence | CTTTTTTATACCATAACATTTTTGGGTTGTTTTGAATTTATTTTTTTGTAATGATTTTGTTTCTTTAGTTGCACACATTGACTGGATCCATCATATGGGT GCAATTTTTGTTGTAAACACTGCAGATCTAGGTTTTTCATGGAACAATGTTGAATTAGGAGCTACCAATTTGTTTTTTTGTCTGTTTATCTGCTTATTTT TTTTTGTTTGAATAATAATTTTGAGTCTTCAAATGTTGAAAGATCAAAAGGGTAAGCACCATTTTATTGTTTTCCTTCCCCAATTGATAAGTTTATAAGT CCCTCATTAACCTGATCTTTATATTCTATGCATTATGCACAGTTAATCTCATTTTTTTTATTGAACCATTTAGATTTGTGTATGTTATAAGGAATTAGCT ACTTTTTTATTTATTAATTTGGCCCTTTTTATCAGTTTCATTGATTTTACACATAGATATCCCTCCTTAAACAAGTTTTACTTGACAATTATTATGACAT AACAAGATTATTCAATTTGTGAATTACGGTTTATTCGGACGATTTATGTTTGCAGGTGAAACAAGAGTATGTTTTGTTCGGGTACTGGCCTGATTGGTGC ATAAAAGAAAGGCTATCTCCTTTTCTAGCAATGTATTTCCTTGTGTGCAGAATTTGAGAGAACTAAACTCTGTCGGATACTGTCTTCAAATATTGTGCTG CATGTGGAGTCTCCTCCACGGTGCAAAATCGTTTATACATGGGGGAGTGGATTGTTGGAGCTTTAATCAATCTCATTGGTAGCATTATTATAAATTTCGG AACCAATCTTCTCAAACTAGGTCATAATGAGAGAGAAAGACAATTACTTGGGAGTGATGGGTTAAACGGAAAGATGCCTCCAAAGCCTATTGCATCCTTT CAGACATGGAGAGTTGGTATGGTCTACTTGCATTTATATATTGGTTTCGTACATTTCACTTAGCTTTCCGATTCCTAATTTTTGCAGTGCTTTGCATAAA TTTTGATATTCAGGTATTGTATTTTTCTTTCTGGGAAATTGCCTTAATTTCATTTCATTTGGGTATGCAGCTCAGGTATGTTCTTTGATAATATTACTTG ATTTTTAGTCTTACATGTACTGTAATATTATGATAGCGTGCATTTTTTATATTTTGGCATGGTTGGCAATGCCATATAATAGTGAAATGAGTAAATCTTT TATTTGATTTGATGGACGGGTAACATGTACTTCCTTTATATCTGATTACAAATTCTTCTGTGTGATCGCAGTCACTTCTTGCAGCCCTGGGATCTGTTCA GTTTGTATCGAACATTGCCTTTGCTTACTTTGTCTTGCACAAAATGGTGGCAGTCAAGGTACTGGTCGCTACAGCTTTCATTGTTCTTGGAAACACATTT TTAGTTGCCTTTGGCAATCACCAATCACCTGGTATGTAATGTTTTACCTGGTGCCGTTAAATCTCTATTTGAATACTTTCTTGGGAAAATAAGGTAGTAA GGCTGATAGTTAGATAGTGCTTTAGATAGTACAACAACAATAATCAAGACTTAGCCCCACTAGGCGGGAGCGGCTACATTGATCGAGCAATGCCATATTG TTCTATCATATATCATGCCTATATAACAATTGAAGCACTATTATCTATCATATATCGTGCTTCAATTGTCATGCATCAAAGAACTTGGCACGTGGTGGCT ATGGCAATATGGCATACAGGAATATGAATTCTCATGCAGTAACAGCCCAAATCCTGTTTTTTTCCACTTTTTGTTTGGTATGATCTCCAATTTTTACGTC CACAAGAAGGTTTGTCTGCCTCTTGCTAAACTAATACTCCAGTAACTTTGTCTTACTTCGGCTTATGGGAAAGTCATGTGCTTCTAAAGTTTGTCTCCAC ATTTCTAGCTTCCATTTAATTCCTCTCTTGATCTCCAACTAGGTCAATATCATATAGAAAAGCATGCATTGTGGAATCGGCTCTTGGATATGCTCAATAA GCAAATCCAATACCAATGCAAATAGGTAGGGTCTCAATGTTGACACTTGTTGTAGTGCTATAGCAATAGAGAAATCTTCTGAGACCCATATTGTGTTTTC ACTCTGGGTTTGACCCATGCATATCTTTGATTACTCAAACGTGATGAACCCAGACTCCTATCTTCTATAGGGTTTTCCACAATACCTTTCTAGACACCTT ATCACATGTCTTCTCAAAATCAATGAAAACCATGTGTAAGTAGTCCCCTTGGTTTCTTTGGTATCGCATAGCGCTTTAGACAGTATCAATTTATCTCTTG CAATTGGATTGTTGACCCTACCAAAATGCACAATTCAGCAAACTGGTAACAGAAATTTACCAAGCTTTCATGTTGGAGAGATAGGATGGAGCATTTATAA TTCTTCTGCTGGAAAATTCATTTGAAATGATATGTATAATATGTTTACTGTGTGTTAAGGTTCCATTTCTGCTAAACAGTTCAATCATATGAATTTTTTT TCAATGGTGCAGACTAATTTGTGGTTAACTTCTTTCATTTCAGTTTACACACCAGAGCAGTTGGAAGAGAAATATACCAATACTGCGTTCCTTCTGTACC TTCTCGCTTTGATCTTGATTGTTGCAGTGCATCACTCCATTTACAAGAGAGGAGAACTTCAACTGGCAGTATCCGGACATGACCTCAGACCCTATTGGAA CACGCTACTACCTTTTTCGTATGCTGTAGTTTCAGGTGCTGTAGGTTCATGCTCAGTGTTGTTTGCCAAATCTCTTTCTAACCTCCTACGACTGGCCATG TCAAATGGTTATCATTTGCATAGCTTGTTCACATACTGCATGGTTCTTTTATTTTTTAGTACGGCTGGATTTTGGATGACCAGATTGAATGAAGGACTGT CCTTGTTTGATGCAATTCTTATTGTTCCCATGTTTCAAATAACATGGACTCTCTTCTCAATCTGTACAGGATTTATATATTTTCAAGAATATCAGGTATT TGACGCGGTAAGGACTACAATGTTTATACTTGGAATGATGTGTGTGTTCATTGGCATTTCTTTGCTAGCACCTGATGAATCGAAAGTTTCAGGTGCCGAT ACTAAGGATAGTTCTTCAGATTCTTTGGTGTCTCCTGCCATTTCAACAGAAATGAACAGGTACTGTATTAACTCTCCATATGAAACGAAAACTAGGAACT GGTAGTAGTCCCTTCATTTTTCCATATTTATGAAACATTAATAATATCATCTTTCAGTATTGCTGTTGGTTAGTTTCAACTTAATCATATCTAATATAAA AACAGATTCCGACTATATTCTTTGATCTTTGATCTTCCGACCATTCATCTGTGTTATAGGCTGGAAGTGTCTTCTCATGATGCACATCACAAAGACACAA GATCATTTGTCAAGGGATTGCTGATGAAGATTACAGACATGTTGGTTAAGGCAAAGAATTCATGTGCATTACATCTTGGTTTCGGTGAAGATACGATCAA TGCATCTTCAGTCCTTGTGATGCCAATGATGTCATCAAGAATGAATGGATTTAGAGGCTCCGGGCTGGAACGAGCACGGATTTTGTCGATGAGAAATGCT TCTGGTTGGAGTAAGATCCCTGTGGATGAAGATGTTGGAAAATTGATTGAAACTAGTCCACTTGTTCCTCCTAGTCCTTGATAGTGATAGGTAGCAATAG GATGTTCCACACCCTGATTTTTTTTTTACTTTTTAATGATTGAAGAAATTGATATACAAAACCATTATTTAATTATTTGCTATGTTGAGCATTCATGTAA TCCCTCTAAGAGGACCAAAAAAGTAGCTTGTATTGTATATACATAATGTTGTACATTTGTGTTTGTTTCAGAACTCATTACCAATATGAATGGAACTACA TGAAATTTATGATAAAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_176658; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_489719
| Blastp | Probable magnesium transporter NIPA8 from Arabidopsis with 65.13% of identity |
|---|---|
| Blastx | Probable magnesium transporter NIPA8 from Arabidopsis with 70.53% of identity |
| Eggnog | NIPA-like domain containing(ENOG410XNR8) |
| Kegg | Link to kegg annotations (AT3G26670) |
| CantataDB | Link to cantataDB annotations (CNT0000893) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019453111.1) |
| Pfam | Magnesium transporter NIPA (PF05653.13) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |