Ll_transcript_489709

• Id Trinity: TRINITY_DN50359_c0_g1_i2
• Name Transcript: Ll_transcript_489709
• Sequence: CTATTTTTCTTTACTGTTTTCTCTTATTTTTTCTGTTTTTTGTCTGTTTCATTCTCTCTTCCTCGCAACCTCGCATTTGTTCACATTTCAATTTCATTTC CTTCTGGAACCTATCAACATTATTACTTTCGTCATTTTGGACCAAGAAAGAGAAAAGTCATAATCTTATTTTTTTTATATATTTTACTTTTCATAACACA AGTGTATCCCATTTTTTAATATCTTCCTTGATCTTCTTCAATCCAACTACCCATTCTCAAAGTTTCATTTTTTCTGCTTCAATTTCAATCACAAGACAAA AGGGTATTGGAATTGATTGTTTATTACGTAATCAATGTAGCTTTTTCGTACCATACATGATTAACATACACTTTTTTTTGGCTTATTTTGAGGTATCATT TTTTATAATTTATCTTGCTCTGTTTTTGCAATGAATTTTTGTCTTTAATTGCACTGATTGAGTTGGATCGGTATTATGGGTGCCATTTTTCTTGTAAACA CTGCAGATCTAGGTTTTTCAGGGAAGAATGTTAGATTAGGAACTACCTCTTTTTTTGTTTATTTGCTGGGTTTTGTTGTTAGAATTTTAGTTTTGTGTCT TCAAATGTTGAAAAATGAATCATTGTGTTGTTGCCCCTTCAAATTGATTAGTTTATTTGCCCCTCAATATATTATATTCTATGCACTCTGCACACTTCAT CTCACTTTTCATGGTTGAATTAATTAGGATTGTGGTTTTATATGGAATTAGCTACTTCCTGCTGCCTTTTGTTTATTGAATTACTTTAAAAAATACCCGG ATTTATTAGCTCGGCTAATTCTACGAATAGATCTCCCTCCATAAACAAGTTTTATGTAACAATTATTAGGACTTAATAGCATTGTTGAAGTTTCGAGTTA TGGTTTATTCGTTTGATTTACGTTTGCAGGTGAAACAAGAGTACTGTTGTTGGGATACTTGCCTGCTTGGTGCATAAAAGGAAAGCCTATATCCCCTTCA GCCCATGGATTTCCTTGTGTGCAGAATTTGAGAACTAACATCTGTTAGATACAGTCCTCAAATTCGTGCTGCACGTGGGGCATCCTCCACAGTGAAAAAT CGTAGATACATGGGGGAGTGGATTGTTGGGGCTTTAATCAACCTTTCTGGTAGCATTATCATAAACTTTGGGACCAATCTTCTCAAACTAGGTCATAATG AGAGAGAAAGACATGTACTTGGAAACGATGGCTTAAATGGAAAGATCCCTCCGAAGCCTATTATATGCTTCCAAACTTGGAGAGTTGGTATTGTATTATT CTTTCTTGGAAATTGCCTTAATTTCATTTCCTTTGGGTATGCAGCTCAGTCACTTCTTGCAGCCCTGGGATCCGTTCAGTTTGTATCAAACATTGCTTTT GCTTACTTTGTCTTGCACAAAATGGTGGCAGTAAAGGTATTGGTTGCTACAGCGTTCATTGTTCTTGGAAACACTTTTTTAGTCGCCTTCGGCAATCATC AATCACCAGTTTATACACCGGAACAGTTGGCAGAGAAATATACCAATTCTGCGTTCCTTCTGTACCTTCTCGCATTGATCTTTATTGTTGCCTTGCATCA CACCATTTACAAGAGAGGAGAACTTCTACTTCCAGTATCCGGACATGATCTCAAATCCTATTGGAACATGCTGCTACCCTTTTCGTATGCTGTAGTTTCA GGTGCTGTAGGTTCATGCTCAGTGTTGTTTGCCAAATCTCTTTCTAATCTCCTACGGCTCGCCATGTCCAACGGCTATCAGTTGCACAGCTGGTTCACAT ACTGCATGCTTCTTTTATTTCTTAGTACAGCTGGATTTTGGATGACTAGATTGAATGAAGGATTGTCCTTGTTTGATGCAATTCTTATTGTTCCCATGTT TCAAATAGCATGGACCCTCTTCTCAATATGCACAGGATTTATATATTTTCAAGAATATCAGGTATTTGATGCATTAAGGACTACAATGTTTATAATTGGA ATGATGTGTGTGTTCATTGGCATTTCTTTGCTGGCACCTGATGAATCAAAAGGTGCTGATACTAAGGAAAGTGCTTCAGATTCTTTGGTATCTCCTACCA TTTCAAAAGAAGTGAACAGGTCAGTGTCTTCTGACGATGTACAAAGCAATGACATGAGATCATTTGTGAAAGGAATGCTGACGAAGATTACAGATATGTT GGTCAAGGCAAAGACTTCTTGTGCATTACATCTTGGATTTGGGGAAGATACCATTAATGCATCCTCAGTTCTTGTAATGCCAATGATGTCATCAAGAATG AATGGATTTAGAGGTTCCGGGCTCGACCGAGCACGGATTTTGACCATGAGAAATTCTTCTGGTTGGAGTAAGATCCCTGTGGATGAAGATGCTGGGAAAT TGCTTGAAACTAGTCCACTTGTCCCTCCAAGCCCTTGATAGTGGTAGGTAGCCCTATAGGATGTCCCAGTGCCTGGATTTTTGTTAGTTTTTTGTCTTCT TTTTTCCCTTCTTTTAATGATTGAATCAGTTGAGATTACAAAACCATTATTCCAATTATTTGCTCTGTTGAGCATGGAATTGGGAAGAGGACACAAAATA TAGTTGTATATTGTATATACATATTGTAAATTTGTGCATAGATATTACATATTTGTGCATAGATATTACAAAAAATAGTTGTATATTGTATATACATATT TGTAAAGACTAAAGACAGATTTTGTCATGGAACTATTGTGGCCGTTTGTGTTTTTTTATATTTACATAAAATTTACATATTTACTCTGTAAAAAA
• Tissue: pods
• Gene name: LI_gene_176658;
• Additional information: details;

Expression of Ll_transcript_489709

FPKM

• PAB: 4.8
• PNAB: 5.6
• PS1: 3.8
• PS2: 5.4
• PS3: 5.5
• PW1: 10
• PW2: 10.3
• PW3: 7.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_489709

• Blastp: Probable magnesium transporter NIPA8 from Arabidopsis with 71.3% of identity
• Blastx: Probable magnesium transporter NIPA8 from Arabidopsis with 71.3% of identity
• Eggnog: NIPA-like domain containing(ENOG410XNR8)
• Kegg: Link to kegg annotations (AT3G26670)
• CantataDB: Link to cantataDB annotations (CNT0000893)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019427598.1)
• Pfam: Magnesium transporter NIPA (PF05653.13)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;