Id Trinity | TRINITY_DN50367_c0_g2_i3 |
---|---|
Name Transcript | Ll_transcript_489061 |
Sequence | CATTAGCTGGGTGTGCAGCTACTTTGGGGTCATATCCCTTTGACCTTATCCGGACTATATTAGCTTCTCAGGGTGAGCCAAAGGTATAAGCATTATTAAA TTTATGGTTACATGGTATTTTTGAAGTAAATTTGTGTGATGCTTGTTAGAGTTCTGAAGGCAAATAAAGCAAATTACCAGTCTGCTTTTCAAATACCCTC ATCCAGTCCAATGACTTTTGCTTGTTCCTTTCCGTCGTCATGACATACCTACTTCTCACTCTTATATGATTTAAAGATTTATGTCGAGATCATCCTTTTT GTTCAGTACCTTCACATGTTGCAAGTGGTGGAGGTGCCCCATTTCAGTTTCTTCTTGAGTTCTTTTCAAGTTAGTGGTACCACCTATAGAATTTGTCAGA TCAGATGATATCATGCACCGAGTAGCACTGGCTTAGAAGCGATCTTAAAAGTGAAATTGACTTTGTAGTGCGCCGTACACTTTTAGACTTTAGAGAAGTC ATACTGAGATTTCTTAAGGGATTGGACTTAAAATGAATAATATAGTTATTTGTCCTCCTTGTCAACATCTGAAGTCTAATCATTTGCTAATATCTAAATA AGTGTAGTGGGAGAAACTCTACAGATGATAAGGGCAATATAATAAGTTACATTTATTTCTATTGGAAAAATCCTGGGACGAGTCAGGGACATGCACCCCA ACTCGTTAAAATATTTAGTGATGGCAGCATACTGCAATTTGTCGTTGAGATCTAGTTCTCATGATTTACTCTGGGGTCATTGTGATTTGTCAATTCAACT ATTATGATTGACTTAAGCTTAGATGGCTAATGGATTGAAGGAGTACATGCCAGTATAATTATGCCTCCTGGGCCTGTATCAGGCTTGTTCATCATCGGTT GTATGGCAAATATAGGTTGTCTCTTCAAAGATTTTTACATCTGTGTATATTGGGTTCTTTTGGCAGATATGGCTCAGGCCTTTATTAGTGAAGTCATGAA ATCTCTTATTGTTCATTTTTCTTTTGAGTACTTGAATATGCCATTTATACTATTTTGTTTGCTTTCTGTTGAAATGCTGCTGATCTCTGATGTTGTGGTC CCTTTAATGTTATTTTTTGTAACAATGCTATGCAAATATTTTGCCATCATTTAGGTATATCCAAACATGAGGTCAGCATTAATTGATATCATCCAGACTC GTGGATTCCAAGGATTGTATGCTGGATTGTCACCAACCCTAGTTGAGATTGTACCTTATGCTGGCTTACAATTTGGTACCTACGATACATTTAAGCGTTG GGCCATGGCTTGGAACCATTTCAGATATTCCAACACCATTGCAGATGATAGCCTTTCTAGCTTTCAGCTTTTTATCTGTGGGTTGGCGGCTGGGACATGT GCCAAACTTGTTTGTCATCCACTTGATGTGGTCAAGAAAAGATTCCAGGTAACCTCTGCTCGTTTTTAATAGGTAGTAGTAGGATCATTTGATCAAATAT CAATCTGAATGTTGTTTTTATGTACCCAAAAGTTAAATCTCAACGTCTTTTGTGTCATTTGATACAAGTAAAGGATATTGAAGAAAACTGGATTTGTAAT TTTATCATGTGAATGTATTTAAGGATCTTCATTCATTGTTTGCTAGATTGAAGGGCTTCAAAGGCATCCAAGATATGGAGCTCGGGTTGAGCATCGCGCA TACAGGAATATGTTTGATGCCATGCAACGCATATTGCAGTTTGAGGGTTTGGCTGGTCTATACAAGGGGATACTCCCATCAACTGTTAAAGCTGCACCAG CTGGTGCTGTAACATTTGTTGCATATGAATTGACATCAGATTGGTTAGAGACCCTATTTTGAATTGATGGTTCACACCTTTTATGATTAGCTATCTCATT CTTTTTTGACAAAATATAAAATTGATTCCCTCATAGGAAAGCCCCAGGGATGTGTTAAATTTTTTAGTAGTAAACTATACTGCAGTTCCATTAGATGGAA AGTAAGATCAAGTAAACATCAACTTTTGTTGCATTTGTCTTTTTTGACAAAATATCATTCTTGATGCTAACATGTTCTGATTTCAAATGTAAATTTCTAA AATGGTCCAAGTGCCTGTCTTTCTGTCTACTTGTGGAACCAAGTAACATGTGTTTGGAAAGTATGAGGTAAAACAATAATGTTCAATTCCCTTCCTATGA GGTAATAATTTCCATGAATTGGCAATGGAAAGTGTGATGTTCCATTTTTAGCTTTTTATCTGCCTTTTCTTAAACAATAACTCAATAAAATTGTCC BLAST |
Tissue | pods |
Gene name | LI_gene_176719; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_489061
Blastp | Mitochondrial thiamine diphosphate carrier 2 from Arabidopsis with 74.49% of identity |
---|---|
Blastx | Mitochondrial thiamine diphosphate carrier 2 from Arabidopsis with 74.51% of identity |
Eggnog | Solute carrier family 25(ENOG410ZRF1) |
Kegg | - |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019450973.1) |
Pfam | Mitochondrial carrier protein (PF00153.26) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |