Id Trinity | TRINITY_DN50370_c2_g2_i1 |
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Name Transcript | Ll_transcript_490838 |
Sequence | ATTTTCTGAGAGATAGAGCTCAGGTTGAGCAATTGCTACGCTATGTCATTGAAGAACCACCAGAAGATGCCGAACACAAACGGGTCTTCAAGTTTCCATT CATTTCCTGTGAGATCTTTACGTGTGAAATTGATGTCATTTTGAAGACTTTGGTTGATGAAGAAGAGCTCATGAACTTATTATTCTCCTTCTTGGAGCCT GACCGATCTCATAGTTCCTTGTTGGCTGGGTATTTCAGCAAGGTTGTTGTTTGCCTAATGATGCGAAAGACAGTGCCACTCATGAATTATGTTCAAGTAA GTAAAGCAAGGTGCTTTTGAAGTAGAATTTACCAGGGCATTCAATAGGCCATGAGTGCTGCAGCAGATGTCTGCTACAAGCCTTCTGTCACACTGCATTT TTTAGGCATGACAATTGGGCTTTCTGTCACACTGCTACAAGCCTTTTTAAAAATGGAATTCCTTTTTAATGATGAATACATCTCTGGTTTGGAGTAGTTT TTAAGTAGCGAGGATATATTATTGGTATTAGAAATTATTTATGCTGCCCCTGCGGTTTTGGTTAGTGCGGATTCTTCATGCCTCTATCTGGGATTGACTA CTATGGAATTTTATATTTTAAAATTTAAGGAGACCACAAAGCACTACTGGGTATTCTACTTCTTTTGTTCTTAGAATCTTAGTACCTTCATGTGAAGCAC TTTTCAGTCTATTTTACAATTAAGCTATATGGTATATTGTCTTCCTTCTGAAACCATCTGTTATGCATGCCCTGCCACACTTAATGCAGGCCCATCAGCA TATTTTTCGCCAACTGGTTGACTTGATAGGAATTACATCCATTATGGAGGTTTTGGTTCGATTAGTAGGCGCTGATGACCATGTATATCCCAATTTT BLAST |
Tissue | pods |
Gene name | LI_gene_176740; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_490838
Blastp | Serine/threonine-protein phosphatase 6 regulatory subunit 2 from Mus with 35.71% of identity |
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Blastx | Serine/threonine-protein phosphatase 6 regulatory subunit 2 from Mus with 35.71% of identity |
Eggnog | Protein phosphatase 6, regulatory subunit(ENOG410XRM1) |
Kegg | - |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_020215332.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |