Ll_transcript_488670

• Id Trinity: TRINITY_DN50372_c1_g1_i7
• Name Transcript: Ll_transcript_488670
• Sequence: GTCGGATTATAACGATGTTAAGCAGTTTCAGCGAAACCCTTGTTGTGGTTTTGCTTCTGAGGTGAAGAGACCGGGTCAAACAGTATCGAAAGGGCATAAG AATTATGATTTGATGCTTAATCTTCAATTGGGTATAAGGTACACCGTTGGGAAGGAAGCTTCAATGACGCGAGAGCTTAGACAGAGTGATTTTGATCCCA AGGAAAAGTTCTGGACCAGGTTCCCCTCGGAGGGATCAAGGATTACGCCGCCCCATCAAACTGCAGAATTCCGATGGAAGGATTATTGCCCTATTGTATT TAGACATTTGAGGAAGCTATTTCAGGTGGATCCTGCTGATTACATGTTGGCTATATGTGGGAATGTAGCTCTCAGGGAGCTTTCCTCGCCAGGGAAAAGC GGAAGCATCTTTTACTTGACCCAAGATGACAGATTTATGATCAAGACTGTGAAGAAATCTGAAGTCAAGGTTCTTATTCGGATGCTTCGAAGTTATTATC AACATGTATCTCGATATGAGAATTCACTTGTGACAAAATTCTATGGGGTACACTGTGTCAAACCCATTGGAGGCCAGAAGATTCGGTTCATTGTGATGGG CAATCTGTTCTGCTCTGAATATCCAATTCATAAACGATTTGACTTGAAGGGATCTTCACATGGCCGAATGACAGATAAACCTGAGGAGGAGATTGATGAA ACTACCACCCTCAAGGATCTTGATCTCAATTATGTGTTTCGTGTACAAAGAAATTGGTTCCAAGACCTCATCAAGCAAATTGAGCTGGATTGTGAGTTCT TGGAAGCTGAGAAAATTATGGATTACAGTCTTTTGGTTGGCATTCATTTTCGTGATGATAATACTTGCGATAAAATGGGATTGTCACCGTTTCTTTTACG CACTGGTATTGATCCACCATTCCTTTGATGCAGCATATATATGATAAGGTTTATGTTATACAAATTCTGAAAGTCTTTTTGTCACACCTTTTAGGCAATC GGGATTCTTATCAGAGTGAAAAGTTCATGCGTGGTTATCGCTTTCTTGAAGCTGAGCTGCGAGATAGGGATCGAGTTAAGTCTGGAAGGTATGTCATAAA TTGTTCTAGTTCCTCAAAATAATGTACAGAGATAGTTCTTAATTGATAAAATGATTGGGTTGTTGTAACATCTGAACCTGTTGTTTGGATGGGCACATGG AGTGTTCCCTGAATCAGTTGGAATTGTTAACCATGATAAAATGAGAACTGTTTGTTTGGGGGATGTATTTGACTATATGCAAAACTGGTCATATTGCCGT CAGAGTGAAATTAATAAATAGTATCATGTTATCATAAGATGTTGTTGACATGTACATTGGTGCTATCTTAAGTTCTAATTATTTGATGGCATTACAAATG ATTAATAATTTCTCCATTTAAATTGATATCTTGATAATAATTGAAAGTAGTATGCATTATTTTGGCAACTCACTGGGCATCGAATGGCAGACAATAGTTG TCTGTGGGTCATGTGTAGGTTGTGCCGTTGTGGTCCTAATTTATTAGATAATATTTGGATTTCAAATTTATGTTTGGCTGAGACTAAATTCGTCAAGTCA ATGATAATGATTGTTGAAGTGTGAATCGTTATCTCCACTCTATCTTTGCATAATTGCATTCATGTTCCTTCATGAAATATGCTACACTTGCTTATAAGGC ACAATTATACACCATATCAGCTTCTAGTTACTTAATGGTTTGAAGATTCTAAATTTTACAATTTTGTTGCATTCTTAAATTATTCAAGGTTGATGATTTT TACTTTAGATGTATATCTGAAAATTTTATTATGTATTAAACTGGGTGGTTCTTGTTTCAGGAAATCGTTAATCAGGCTAGGAGCCAATATGCCCGCAATA GCAGAGCAAATAGCACGGAGTGATTTTGATCAATACATTGGTTCTGGAATCAGGCATTTGAACCCCAATAGCAAGGGGGAGACTTATGATACCATTCTAT ATTTTGGGATTATTGACATTTTGCAAGATTATGGTATTAGCAAGAAGCTTGAGCATGCTTACAAGTCCTTGCAGGTTGACTCTACTTCAATCTCAGCTGT TGATCCAAAGCTCTACTCGAAGAGATTTCGTGAATTTGTAGGGAGGATATTCATTGAAGACTGGTGGCATTGGGTACAAAATAAGCCTGAAATATGCATT CATGAAGGTTAAAATCCCATATTGATCACAACATCTACTGTGGCGAGTCTTTCAGAATACTCCATGATCAAGTGGCTGATGGAGCTAGCCAGAATTCGGG TTGTTTTATGGCTGAATTTTGAAGCTACAGCCTTAATGGCGATGGTATGCCAAAGGCAGGGAGAACATGTACATAGACAATGAGGTGAATTGTTTTGTCT TTTCTTTGTGGGATTTTTCTTGGTGGGGCTTGTTAATCTTTTTTATTACAAAATAGGATGTGAATATGATGCGGAAGTTAGGAAGAGGGAACAAAGGGTA GTGTTTCCTAGGCATTAGATTCAAAATGGGCGGAGTTTATAAATAAATAAGAAATGGGTAGATAGTTGGGAATAAAAACAATTGTACAGTTATTATTATA CAGAGGATGGATAGTTTAAGGAATTGTTTTGTTCGCTGTTGATTTTTCTTGATTTGATAAGAAGAAATATACTTAAGTGGGGCATCTTTGAGGTGCTGAC GAAAAAATAAAAATGCATCCTGATTCTCTTACTTAGGACTATGTAAGTCCAATGACAT
• Tissue: pods
• Gene name: LI_gene_176758;
• Additional information: details;

Expression of Ll_transcript_488670

FPKM

• PAB: 0
• PNAB: 0.3
• PS1: 0.4
• PS2: 1
• PS3: 1.3
• PW1: 0
• PW2: 0
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_488670

• Blastp: Phosphatidylinositol 4-phosphate 5-kinase 1 from Arabidopsis with 79.07% of identity
• Blastx: Phosphatidylinositol 4-phosphate 5-kinase 1 from Arabidopsis with 79.07% of identity
• Eggnog: whole genome shotgun sequence(COG4642)
• Kegg: Link to kegg annotations (AT1G21980)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019456489.1)
• Pfam: Phosphatidylinositol-4-phosphate 5-Kinase (PF01504.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;