Id Trinity | TRINITY_DN50377_c1_g1_i3 |
---|---|
Name Transcript | Ll_transcript_489741 |
Sequence | AAGAAATTGGACCTGACGTTTGTGGCATCTTCTGATAAATGGTGACATGTTGAACTACAGTTCGGATATAGAACTGGATGACATTAGAGTTCAGAATATA GCTGAGAAAGATGTCAGTGATGAAGAGATTGATGCAGAAGATTTGGAGAGGCGGATGTGGAAGGATCGTATCAAACTCAAAAGGCTAAAGGAAAAACAGA AGATGGAAGCACTGAAAGCCGCAGAGAAGCAAAAGGCGAAGCCGGCAACTGATCAAGCTCGTAGGAAAAAAATGTCCAGAGCACAAGATGGGATTCTTAA GTATATGCTCAAGCTTATGGAAGTCTGCAAAGCTCGTGGATTTGTTTATGGTATCATTCCTGAGAAGGGCAAGCCAGTTGGTGGTTCCTCCGATAATATT AGAGCATGGTGGAAAGAGAAGGTGAAGTTTGATAAGAATGGCCCTGCAGCCATAGCCAAGTATGAAGCAGAGTGCCGTGCTATGAGTGAGGCTGATAATA ACCGAAATGGGAACTCTCAGAACATTCTCCAAGATCTGCAGGATGCAACGCTTGGGTCACTCTTATCTTCTTTGATGCAACATTGTGATCCTCCTCAGAG GAAGTATCCATTGGAAAAGGGTGTTCCCCCTCCCTGGTGGCCAACCGGGAATGAAAATTGGTGGGTACAATTGAATTTACCTCGTGGTCAAAGTCCGCCT TATAAGAAGCCGCATGATTTGAAGAAGATGTGGAAAGTGGGAGTGCTAACTGCTGTGATAAAGCACATGTCACCTAATATTGCAAAAATAAGGAGGCATG TGCGCCAATCAAAATGCTTGCAGGACAAGATGACAGCGAAGGAAAGTGCAATTTGGCTGGGAGTGTTAAGTCGAGAAGAATCTCTCATTAATCAGCCTAG TAGTGATAATGGTGCATCTGGAGTAACTGAAACGCCACCAGGAGTTCGAATTAAAAATAAGCGAGCTGCCGCTAATAGTGATAGCAACTATGATGTTGAT GGTGCTGATGATGGTGTTGCCTCTGTTTCTTCTAAAGAAAATACGAGAAACCAGGTTATGGAAACTGAACCATCAGATAACTCGCACAGGAATCATGTCC CAGATAAAGATCAAGTTGAGAAGCAGCCCCGCAAAAAGAGACCGCGTTTGAGGTCAGGCACCACTGACAAACGACCGACACAATCTGGCAATGAAATCTT ACATGTTGAGCCAACAAGCAATATGCTCGATATGAACCAGATGGAAGCACCGGTAGTTGAACTTCAGATTCATGGAAATGAACAAATCAATGAGACAGAT TCTGCTTTGAGACCTATGGAAAAAGGACTTGAGGAGCCAACTCAACTACCAGCAGAATTTGATCATTTCTCTTATCTGCACTCAAACAACTTAATCCCCT CAGAAAGCTTGTACATGAATGGAAGGCCTCCATTGCACTATCCCGAGGTGCTAAACCCTGACGTGCATCATGACACTACTTATGACCTTTATAATCCAGT GGCAGGGTATGGGCAGAGTCGTGATATGCCGCAATTGCAGCCTGGAAACAGTGAACCCATTAGGCCGGAGAATGACACAGTTTCTATGCCACCATTACAT ATGAGAGGGGATGAAGTTACTGGAGGAGACTTGCAATATTTCGGTAAAGAGACATTTCCAAATGAGCTTGATAGACCTATAGATCACTCTTTCTTTGGAT CACCGCTCAATAGCTTGCCATTAGATTTTGGACTCAATAGTCCACCATTCAACATAGATGATTTCTTGGGTGAAGATGAAATGATGCAATACTTTGGAGC ATAGATTATGGGAACTGAACTACACAATTTGCTACATTTGCTGCTTAGTTGGGGGAAGGTACTCAGATTGGTGTTAGTTTTTATGCATCTTAAGGTTGAA AGATGTAATCTTAGCATGCAGGAAGAACAGAAGCATAAACTTGCTCTATTGATTACCCCATTTACATATAAATAATTCTGTTGTTTGGGGTTTCATGTAA ATTTTATTGGAATAGATTTGCTTCTTAATCTAGAGGGCGAGCCTCCACCCAACGGTGAGATTGTTATCTAGTAAATCCTGGAAATAGTCTCTATCTGCTT GTAAGATAAGACTGTATAAATCTATTTTCTACTAAGTGGGAGTCTCGTGTATTGTGACGCTGTTTTTTTAGATTTGCTTCTTAATTTAAGAAATAATCAT TTTTCTTAGTGCTGCTCTGTGTAGATTTGGCAGGTGTGCCACTGTGCATGCACGTTTCCAGAACTCTCAAATGCACTACCCTTTACCTTCTAAATGGTTA TCTTCTTTTAGCAACATAGATTCAGATACAGAAAACAGAACCGTGGCTCATGTCATTAAGCTGTCTAATATAACTCTGAATGAAGTGAATCG BLAST |
Tissue | pods |
Gene name | LI_gene_176776; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_489741
Blastp | ETHYLENE INSENSITIVE 3-like 3 protein from Arabidopsis with 56.23% of identity |
---|---|
Blastx | ETHYLENE INSENSITIVE 3-like 3 protein from Arabidopsis with 55.38% of identity |
Eggnog | ethylene insensitive 3-like 3(ENOG410YA8W) |
Kegg | Link to kegg annotations (AT1G73730) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019448290.1) |
Pfam | Ethylene insensitive 3 (PF04873.12) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |