Ll_transcript_489550

• Id Trinity: TRINITY_DN50388_c1_g4_i10
• Name Transcript: Ll_transcript_489550
• Sequence: AATTATTGTCACAAGTTTTGAAAAACAGAAAAAACACGGACATCTATCTCTTCCCTTTCTCCGGCGACTCACAATCTCAATCGCAACCTCCGAGCCACCG CCACCACCACCGTGGAACAGAGTAACCCACAACCCCTTTTCAACATATATACTTCAGTTTCAGAGAAAAGTAGAATGAGCAAAAGACCAACACCTGATCC TGTTGCAGTGTTACGAGGTCATCGCGCTTCTGTCACTGACGTTTCCTTTCACCCCTCTAACCCCATCCTCTTCTCATGTTCTTCTGACGGTGAAGTTCGC ATTTGGGATACCCTCCAACATCGAACGCTTTTTTCTTCATGGTTACATAGTGCTGCTCATGGCATTGTTTCTGTTGCCACCACTCCTTCTCTCCCAACCA ATCAATTTCTCAGCCAGGGTAGGGATGGCACTGTCAAACTTTGGGATTTCAATGATGCTGGTTTGTCAAGGATTCCATTGCTTACAATAGAGACAAACAC TTACCACTTTTGCAAGCTTTCCACAGTCAAGACTCCTTCCGTCTTGTCTAAAAGTGGGAAAGAATCAGAGTTCAGAAGAACGCCTAATGGAGAAATTCCA GAGGATAAGAAAGAAAAGGCTTATGATGATCAACCATGTTTTGAAAGCCGTGAAGACAATATGCATCATGAAGGGCTACCGTATGTGGCTTTATCAGGGG AGAACTCCTCTCAGGTTGAAATTTGGGATCTCAAGTCAGCTGAAAGATTTGTGCAGCTCCCTTCAAATATCACCAGCAACTCTTCAAGTGTTTGCAACAA AGACAGAGGGATGTGCATGGCACTTCAACTGTTTTCACCATCTGAATCACGGGGATTTCTAAATGTCTTGGCTGGGTATAATCTTGATCCTATTTCTTGT GTCAGCTCCAGCTGATATTTTATTGTTGACGTGGCTTCTAAATTTATATTGTATTGATCAAAGCAGTGACTTCTAACTGATATGATCATTAGAATCAGGT TTGTTTGGCTTTTGGTGTGTGGAAATTTACAGATTATACTTCAACTTCTGTGCTATCTGAACCATAAAGCTAACCCCATTTAGCATGACTACCTTCTCAT TATCTCATACTTTATGTTATGAATCCCGTAGGTACGAGGATGGTTCCATGCTCTGGTGGGATGTACGGAATCCCAGAGTTCCATTAACTTCTGTCAAGTT CCATTCTGAGCCAGTTCTGAGTATCTGTATTGATGGGTCTTGCAATGGGGGTATCTCGGGAGCAGCAGATGACAAGATTGTTATGTATAGCTTGGAGCAT TCTACGGTAACTTCATTTACGTTTTGACTCTTTTCCACTGAAGCAGTGAAAAATCTGCTCATTTGAATTGTAAATTTATTTATCTTTTGTAAATCGTTCT TTACATTGATAAGAATCGGGACATAATAAAGCGGTAATTCTTGTAAATAATTCATTCTGTAGATCTTGCCTCAAGTCAGTGTTCTTGTAATCATCTTTCA GCATTCCAAGTTTATTTCCTTAATTTTATATGATTATATTCATGTACCTGTCCATACTTCAAGCTTAAGGATCAACTTAGTTGTAGCGTACCAACAAGTC AGTGATTTTTTACTACATATACAGAAAGATAAAAGGATTATGAGAACTATTGCTTGGCAAAACCTAGAACTTGTGACAGGAGCCATTAGTGACCATACTT AAATGAAGCCCTCACATGGATGTTAACTCATTCATATTGACAACAGGTTGCTTTTCATGTCAAGCATGCTAAACTTGTGTGAATAAACTGGGATCGTAAT ATATTCGGTAAAAAACAATCATAGATTTTAAGTAATGACAGTTCTTGAATGCTATATGTACTGCTTTTGCAATGAGTTTGTCTGGCTGAAGATCAGAGCA ACTATAAAGCATGGTATGGGAATAGGAAATGATACTTTAAATCACGATTGAATTTCCGGATTATCTTCCATGAAAAAATTTCTTATGATGGTTTTTCAGT TTGCAGCTTAATACTTGTTACACCATTTTTTTGTTTTGCATACTTATATTTTCTTTGTATCATTTTGAGTTAAGGGTACATGTGTTTTCAAGAAAGAAAT CAGTTTGGAACGACCGGGCATCTCAGGTAGCTCAATCCGACCCGATGGAAAAATTGCAGCTACTGCTGGCTGGGACCACAGAATAAGGATATATAATTAT CGCAAAGGAAATGCTTTAGCAATATTGAAGTATCACCGTGCCACGTGCAATGCTGTAACTTATTCACCAGATTGTAAGCTTATGGCATCAGCTTCTGAAG ACACAAATGTGGGGCTATGGGATTTGTATCCTCCTCAATTATGAAAATTAATTTTATGAATTTATTCAATGTACGTAATTACCACATAAATGTATGAATT TATTCAACCTCTTCAAATTAAATAATTTGTGGTTCTTACATTTATGTGGTAACTGTTTTATTCAACTAGAAATTGATATTAGAGTCGCTTATGACATTAG CATAATTCTATGCATCGGATTTTAGAGTAATTGATGAGTTAAGAGTTCAATTTTAATGTAATATTATTACATTTTTTAATATGTATATACTGAGTGTAAA ATATTTTTATAATATTAGTAAATCATAATATGCTTGATTCCCCA
• Tissue: pods
• Gene name: LI_gene_176845;
• Additional information: details;

Expression of Ll_transcript_489550

FPKM

• PAB: 0.4
• PNAB: 0.1
• PS1: 0.4
• PS2: 0.1
• PS3: 0.1
• PW1: 0.3
• PW2: 0.4
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_489550

• Blastp: Protein DECREASED SIZE EXCLUSION LIMIT 1 from Nicotiana with 55.23% of identity
• Blastx: Protein DECREASED SIZE EXCLUSION LIMIT 1 from Nicotiana with 55.23% of identity
• Eggnog: -
• Kegg: -
• CantataDB: Link to cantataDB annotations (CNT0001698)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019416003.1)
• Pfam: WD domain, G-beta repeat (PF00400.31)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;