| Id Trinity | TRINITY_DN50397_c2_g1_i6 |
|---|---|
| Name Transcript | Ll_transcript_490633 |
| Sequence | ATTTCCCATGGGCCTCTATATGAATATATATTTTTCCTTCTCACGGGGTAATCTGCTATCACATTCTCTTTCTATTTCTCTCTTTCTCTAACGCTTCTTT CTCTTCGATCCGAACCCCATCGTCTTCAACTCTGATAGATTATCTTTCTATCAACGACCTTTCATTTAATCCCCTCATTCATATAATCGATTATTCCATG TATCCATCTTCGTAGCTTTCTGCAATTGCTTCTTTAGGGTTTCTACGAGGAATCACGTTTTCCGGTTATATCTGGGGAATGAAGGAGAAAGAGGATGAAA ATGCATCTAAAAATACAATTATTGACTCCAGAAAGATGAGAACACCTGATGTTAAGTATGTATCAGCACATTTCAATACCGTTGGTGGAAATAATGTCGT CGTCATTCCCAAGAGAACGAGTAATGTAAATTCAACCAAAAAAAGTAATATTAATGCCAAAAAGATGAGAAATAATGATGTTAGATATGTATCAGCATAT TTCAATACTGTTCCTGAGAAAAATGTTATTATCATTCCCAAGAGGCCGAGGATGAAGAATGAAAATGAAAATGAAGTCGAAAACAATACAAATATTATCT ATGTCTCGGCTTATTTTGATTATAGTAAAATTAGGACTAAAAATGTGGTTGTCATACCTCCTAGGGCAAAGAAGAATGAATCTGAAATGATTGATATGTA TAACCATATAAAACCTCTGAAATCACTACCATCTGAGTTGTGTAGTGACGCATATAGACGAAAAACTGACACTAATACTTGGAAGCCTCCAGAGTCTTTG TTCCGTTTTGAACCTCTCCTTCAAGAGTATTATACTTATGACCCTTGGAGAATTCTTGTCACAAGTGTGTTGTTAAACCTGACTACCGGTGTACAGGTAC GTCGTGTTCTTTCAAACCTATTTAGCTTATGTCCAAATGCCAAATCTTGCATTGAAGTTGAAGTAGAAGAAATAGAGCAAGTAATAAGGACTCTTGGTTT GCAAAATAAACGGGCAAAGGCATTACAACGCTTATCACATGAATACTTGTATGGAAGTTGGACTCATGTAACCCAACTCCACGGTGTTGGCAAATATGTT GGTGATGCATATGCTATATTTTGCACCGGAGAGTGGAGAAATGTAACCCCAACTGATAAAGAGTTGCTTTGTTATTGGAATTTCCTTTGAGTATAATGTA AAAAATGTAATTTAATGTGATTTGTAGAACTTGATATGACATGTTCAGTTTTTTTAATTTCCTTATTTAATTTTACCTTTTCAATTATTTATCAATAACT GTAGGTGGGCCTATAAGCCCTTTTTAAAAAGGGCAGGACATGTGAATTTTCCAAAAATGAAAAGGAGGTATGTTTGTGCA BLAST |
| Tissue | pods |
| Gene name | LI_gene_176918; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_490633
| Blastp | Methyl-CpG-binding domain protein 4-like protein from Arabidopsis with 43.61% of identity |
|---|---|
| Blastx | Methyl-CpG-binding domain protein 4-like protein from Arabidopsis with 44.36% of identity |
| Eggnog | Methyl-CpG binding domain protein(ENOG4111HPQ) |
| Kegg | Link to kegg annotations (AT3G07930) |
| CantataDB | Link to cantataDB annotations (CNT0000576) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019458151.1) |
| Pfam | HhH-GPD superfamily base excision DNA repair protein (PF00730.24) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |