| Id Trinity | TRINITY_DN50398_c0_g1_i6 |
|---|---|
| Name Transcript | Ll_transcript_490915 |
| Sequence | CCCATCTCATACTTACCCCTAGCTATTACCTACTACTATATCTCCATATCATATGATCCCAATTTCTTAGTCTTAGTAATATTTCTTTACATTAAAAGTA AGAAATTAATTCATTTCAAAGTTCGTGAATGTCCATCCTACCGAGTGTCCTAACAATATAAAACAAATTCTTACATATTGAAGCCATGAATATTGAAAAA ATCCAAAAAATAAATGAAGATGAGAATATTCTAATCCATGAATGAGAGATTAACACTCATACACCAAATCACTCACTTCGAGATCTGAAATCTCTCAAAT TCATTCAAATGAGAGAACCATCGCCGCCGGTATTCGAAGCCAACGGCGTCGCTTCTCCGCCGCCGCCGCCACCTCCTCAATCTCTCCTTGAGAGACTCAA GGACTACGGTCAAGAAGACGCTTTTGCTCTCTGGTATGAACTCTCCCCCGAAGAACGCGACCTCCTCGTCAAGGACATTCAGAGTTTAGATCTTTCGAGA ATCGATCGAATTATTCGATGTTCACTTCGATCTCACGGGGTGCCGGCGGCAGCGATAGAAGCGGTACCGGAGAGTAGCGTGTCGACGGTGGAAGAGAGAA GTATAGAGGAAAGAGAGAGATGGTGGAAAATGGGGTTGAAGGCTATTTCTCACGGCAACGTAGCTGTATTGCTTTTATCTGGTGGCCAGGGTACTCGGCT TGGAAGTTCAGATCCTAAAGGATGTTTCAATATTGGGCTTCCATCTGGAAAATCACTTTTTCAACTCCAAGCGGAGAGGATTTTGTGTGTACAGAGACTA GCTGCTCATGCTGCTAATGAGAGTTCTGCTTCGGTGCAAATACACTGGTACATAATGACCAGTCCATTTACTGATGGTGCAACTCGCAAATTCTTTGAAA ATCATAAATTTTTTGGTCTGGAAGCAGAACAGGTTACCTTTTTCCAGCAAGGGACCATCCCCTGTGTTTCCAAGGATGGTAGATATATTATGGAGACTCC ATGGAGTGTACAGTTTCTTTCTTTTAGCTTTAAGCCAAATATGTGTTCTACTCATTCTTAAATTGACGTCAGCTACAAACATAGAAAAATGGTGCCAGAA TTTACAATCCAATCTATGATTGCTGATAAACGATATGTGGATTTCATCATGTCATAGTTGGAGCATCTGCATGTGTCTCAGTCTCAGTATATCCTAATTT AAATTTGGGTGCTGCTGCATCTTGGTGTCTACTGAGTGTTCAAGATGAAGTATTTGTTAACATAAATTCATGGATATACACAATAATAGAAATTTAGGGT AAATAAGCATATTAGGATAATGGCATAATGGTTGCTTCTTTTTCCCTCTCACTGGGAATGGCAAAACATTTATGTGTATAAAATATTGAAAGAAAGCGAG GAAGTAAGAAAAATAAAATAAACTAAACTAATCTATTTTTATATAATAATTAACTTCACCTATAACCTTGTTTTTTTATGATCCATAATAACTATGTCAA GAGGGTGAGCATCAACAGTTGGACACAATGTAAGGTTGTTGTCTTGTGACTAGAGTCCATGAATTCAAATCCTGGAGACCATCTCTCGGTTTGTAGGGAT AAGATTGTGTACCATTACTCTCCCGAGACTTCACTAGGTGTGAGCCTCATGTGTTGGGCTACCCTTTTATAGTAAATATGCTAATCGAATTAAGAATTTT TGGACCTTTGGAACAGACAGTGCAGGATGAAACTACAAAATACAGATATAGATATTGGTTCCTTCTAAGGAAGACAAAATTCAGTATTCTAGAATACTGA ATAATAATCACTCGCTCCTGACTTAAAATCAAGCGTGATTTGCATGGGCATTTAGTTATGTGGAAAAATGAAGGATTTACAAAGTGATAGGAGGATTATG TTTTGATTATTGCTCTTGTGCCTGATTTGGGAAATCCAAACCTTTGTACTGGACAGGCAGAGAGATTAGAAAGCTCGTCTGAATTATGGCTTTCATTTCC ACATTTCTACCTTTGTTTTCCATGTTTCAACTGTGTCTTTGTGAATGTCTTATCCTCCTTATCAGCCGTATACTCTTATTCCCTTATCATAAAAAATTCT TTGGTCCCAGCAAGATTGTCACTAATGTTAATTGAGCTTTAAAAGACATGTACTATTTAAAATTGTGGATTACTAGTTAGTAAGACACATTTAGTCACTA ATACATGAAATTATTAGGGGGTATCAGACTACTTATGCAATGACACTTTTTTCAAAAATATTTTAGCACATGCCACTGATTAAGACATTTTAACGATTTA TTAAATTATTTCCTTGATTTTCTCCCCCTTTTTTCCAATTATTTTAAGACCTGCAAATATATCCAATTATGGGTTTACTCTCTAATATCAATTCTATCTT ACTGCCTCTAAACTGTATAGTTCCTTTCTTTATTATGACCCTATTTTGAACTTTGGCTGGTTGTTTAATATTTAAACTTTTACAACCAGGTAGCAAAAGC TCCTGATGGTAATGGCGGAGTGTATTCAGCTCTGAAATCTACCAAATTATTGGATGACATGGCCTCAAAAGGAATTAAGTATATTGATTGCTACGGAGTT GACAATGCACTGGTTCGAGTTGCTGATCCAACTTTTTTAGGTTACTTTATTGATAAAGGTGTAGCTGCTGCTGCGAAAGTTGTCCGCAAGGTAACAGACA GATTAATTCCTGTCTTGCTTCTTAGTTCTTAGCAATCTCTGAAATAACCATTGAATTTGAGAAGTCAAGTTATATATTACTTTAATTTTGTTGCTTCATG CAAAGAAAGAAAACCTCCAACCTGCGAATATACCTTATCTCTTAAAATAATTAGCATTGTATTTTTTAGGAGTTCATTCTTAAATAGGTAGGCAAACTCT CAACCCCTTTGTTTGTTCTCTATTTGTAGATTATGTGTTATGGTTGTGTATGATTAGATGGATGCTATAATAAAATAGTAGTTGATTGATAATGACTCTG AATGAATTGTTGTTTTCAGGGTGCCCCCTCGTTAGTTTCTTCGTTGTTATATTGCTTGCAATAACTGGAAAAAAATTCAGTATTGCATGTCATTCAGTAC ATTAGGGAGGAAGTTGAGGTAGCTCTTATTATAGAAAAGGTGATAGAATCGCACCTTATGTGATTTGGACATGTATGGGTAGACCAGCAGAGTCCCCGTA AGGAGAGTAAATCAAATAGAGATTAGTTCAATTCGCAGAGGAAGAGGGAAACCAAGAAAAACCATGTGCAAAACAATTAAGAAAAACTTAGAGATCATTG CTTTCTCAATGAATATGATTTATGATACATTATGGTGTTATGCAGTCCATGTAGCTGACCCCATCTAATAGGATAAAGACTTGTTTGTTGTATTCTAATT TAGGACCCAACTTATGATCCCAAAGCTGAAAAAACTGCTCCATTGCAAGCATAACAGAGAAAATATAAAATGGAACTCAGACACACAATTACTTCAGCTG GTGGACCATGATTACAGATCTACCTATGACCTAAATTCACATGTTGGATATAAATAATACAAGGTCAACATGTACTTAATAATTTAATTCCAAACTGATG CAATTTGACTTGCAAATCTCTAGGTTGCTCAATCCCGTGCTTCGTTATAGACTGCTCTTTTGTTGCATTCTCAAGCTGCATCATCATATTCTTATATTCC ATCTACGTGGTTAAGTGCCACACAGCTCTTTAGGAACAGAAGAAAAAAATACATGTTGGAGAAATGCTTACATAGAAAACAGTGGAGGCATGCATAAAAA TATATACCCATGTAATAATTGAATTATAATATGTTTGAAGTTGTTTATTTTCCTGTGATGAAAGTAACATTCAGGATTAGTAATTTATGAAAGTCAGATG AGGCAGATGATAAGTAAGGTTTTCTTTTTAAAAATTATTGCATTTATTTTGTGCTTCCCATATTTTATGCTTATTAGATCTTTTCATTATACAACAGGCA TATCCACAAGAAAAGGTTGGTGTGTTTGTACGACGAGGTAAAGGTGGACCTCTTACTGTTGTTGAATACAGTGAATTGGACCCTTCACTAGCTTCTGCAG TCAATCAATCAACTGGTCGTCTTCGTTTTTGTTGGAGTAATGTCTGCTTACACATGTTCACTTTGGATTTTCTAAACCAGGTGGCAAATGGCCTTGAAAA GGATAGCGTGTATGTCTATCGCCTTATTTTGCCCCCTCCTTCCCTCATTATTTATTCTATATGGCTTCTCTTTGTTATATGAATTCCGAGTGAGTACATT ACATTATTGAAGATGATAAAGGACATTACATTATTGAATAGAAATTTGATGGTAGAAAAAGGATCAAGAAGCTGCGTAACTAGTTTATTCAGATAACATG TACTACTTGGGAAGATTAATCACATTTTTTTCTGAATTCAATTCACAGTTCAAAAATTAAAAACGAGAAAAGAAAAGTGTGAGCACTGCATGTTATATAT GGTTTCTCGTGACATATAAACAGCTTTACTGTTTGTTCAATGCAATTTATACATATATTTCGTTACTTCTTTCTTGTATCATAGAGGAACAATAAGAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_176923; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_490915
| Blastp | UDP-N-acetylglucosamine diphosphorylase 2 from Arabidopsis with 68.72% of identity |
|---|---|
| Blastx | UDP-N-acetylglucosamine diphosphorylase 2 from Arabidopsis with 68.72% of identity |
| Eggnog | pyrophosphorylase(COG4284) |
| Kegg | Link to kegg annotations (AT2G35020) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019447938.1) |
| Pfam | UTP--glucose-1-phosphate uridylyltransferase (PF01704.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |