Ll_transcript_344202

• Id Trinity: TRINITY_DN50401_c1_g2_i12
• Name Transcript: Ll_transcript_344202
• Sequence: TTCTGTCTCTAAAACCTAAAAACATTGCAACTGAAAATGGTGCAGTGAGTGAATGTGAAACCCAACAAGGTTCAAACCCACATTTCACCATCACATTCTC ACTTCTTTTGGTTCACTTTCTGCTTTTTACTAATCTTTATCTTTTTATTTATTTATTTATTTATCGCTCAGTGTTAACTCTTTGTTTTACATGATAGATC ATAATTTATTGACTCGGAGACAAAAAGCATGTGGAGTTTTTCATAAAAAAAATTGTAACTTTTGAAAATGTAGATTGTAGCCTTTGAAAGCTAGCTTATT TCAGAAGCTATAAGCTGTTTCAATAGTGAATGTCTCATTTTGTCCTTCAATTTTAAGTCAATGTAATATTACATGCCCTTTTAACTTTTAAGTCATCAGC TAGTTGCAAAATTGATTTTACTCATTTTACCAAACAATTCTAATTCAATACGCTCGCTACACAAGTGAAACCCTTCACCTAGCTTCATCTCTATAAGGCT ATAAGCTACAATTCTAATTCAATAAGTTACTTTTGCCAAAGAAAACCTTAGTAGGTGTAAACTTCAGTGTTTATTCTTCTTCCCAAACAAGGTTTTAGAT TCATGAATTCTCTGAAGTTTAATTCTGTGGGGGGAGCATGTAGCAGAAGTAACTGCTGGCTGATCATAAATGGCACCCAATCCAAGAGTAGTAGCGGCCT GTGATGCAATGGCAAATCTTGGGATTCATGTATCAAAAGTGAAGCCAGTACTAAAGAAACTCCTGAAATTGTATGATAAGAACTGGGAACTTATTGAAGA AGAGAACTATAGAGCTCTAGCAGATGCAATATTTGATGTGGATGAAGATAAGGTACCAGAGGTTCATATAAAGAAAAACAAGAGAGTTGATGAAGGAGGG GCAGATGATGAAGAAGCTCATCTGCATGATGAGCCATTGCAACCTTTGAAGAGATCACGTTTAAGAAGACAAGAGGCTCAATCTTCACATCCGCTGAGTA GCTCTGGCCCCAGCTCAGCTGCCTGTTCATTGAAAATACCTAAACTAGAAGATGGGATAGTACCTGAGAGTAGTTCTGAACCGCAGCATCGAAGCACGAC AGTGTTATCAGATGGAAATGCACGAAATGAAACACATCAACTTCCACCACGAGATGGCATTGTTGACAAGGGAGAGCAACCTGTATCACCTCATGTTACT TATAGAAGGAGAAGGTTTACATCTGAAAGAGCAACCCCAGCAGTGCCCTTGATCATACCCAAGGATGAGCCTATCAATGACTTGCCAGATTTTGTATTTC CCCTTACAATGATTCTTCCTGAACAATCAAGAAGAAGGGACTCTTCAATTAATAATGGTGCAGCTGAAAAGCAAGATGGCCATGACACAGTGGGGTTGCC ATGCAGAGATAGAGAAGTTGGAGCTCAAGATATTCTTCCTTCCTCACATAACGAAGTGGCTTCTAATGTTGAGATAGCCTCTCCGGCTGTGGGAGAGGTA ACTGCAGCTGAAAAGCAAGATGGCCATGACACAGTGGCATTGCAATGCAGGGATGGAGAAGTTGGAGGTGAAGATATTCTTCCTTCCTCACATGAAGAAG CAGATCCTAATGTTGAGATAAACTCGCCTGCTATGGGGGAGGAAGGACCTGCAATGATAACACCAACTGTTAACATGTCAATGGAGCCTGGGGAATTTGA GCCCCTGCTTGTCGAAGGAAATGAAGATTCTGTTATGCCTTGCATTTCAAATGGATCAATCGATGATATGTCTTCTGCTGACTTGGTGGCACCTCAAATT TGTAGTTCCAAACCCTGCCCAAGTGGTCTGGGTGATGCTGTATTGCTTTCCAAGAAGTTTGGAACTAATGATTTCATAGAAAGTGATGATGGAGCAAAGT TGGTGTGTGTTGTGAGTCCTAATTCACCCAGTTTAACACTTGTTCCAGAGCATCATCCTTCAAGTGAAATGAAGACTTCTCAAGATGTTAATGACCTAAT GAAGGGAGAAGAAAATGTGAAAATTTCATGGGTGAATAATACTAGTACCGATTGCCCACCACCCTTCCACTACATACACCGAAGTGTTGTGTTCCGAGAT GCTCATGTCAAGATTTCTCTATCTCGTATTGGAAATGAGGATTGTTGTTCCACTTGTATGGGAAATTGTGTGTTGTCATCAAAACCATGTTTTTGTGCAA ATAACACTGGAGGTGAATTTGCATACAATGCAGAAGGCCTACTGAAGGAAGAGTTCTTGAAAGAGTGTATTTCCATCAGCCACCACCCTCAACATTATTT TTATTGCAAAGACTGCCCACTTGAAAGATCAATGAGTGATGGTTGTTTAGAACCATGTAAAGGACACTTAAAGAGGAAGTTTATTAAAGAATGCTGGACC AAATGTGGCTGTGGAAAACAGTGTGGCAATCGGGTTGTTCAACGAGGAATAACTGGCAAATTGCAGGTATTTTTCACTCCAGAAGGAAAAGGTTGGGGTC TTCGTACCTTGGAGGACCTGCCAAAAGGTGCGTTTGTGTGTGAGTTTGTTGGAGAAATTTTAACCACTGAAGAGCTGAATGAGAGAAACATGAAATGCAC TGGGAATGGGAGCTACACATACCCAATTATACTGGATGCAGATTGGGATTCAAGGTTTGTGAAGGATGAAGATGCTCTATGCTTGGATGCGGCATCTTTT GGTAACATTGCCAGGTTTATCAATCACAGATGTTCTGATGCAAACTTGGTTGAAATCCCAGTAGAAATTGAGGGCCCTGGTCACCATTACTATCATTGTG CCTTTTTCACTTCCAGAAAAATAGTCGCACAAGAGGAGCTCACTTGGGATTATGGCATTGACTTTGGTGACAGTGATCATCCTGTTAAGCTTTTCCAGTG TAGATGTGGCAGTAAATTCTGCAGGAATATGAAGCGATCAAATAGTAAGTTCAATCTACCAATTATTTTTGTACTTTCCATCATTAAAAATGTGTCCCTT TACCTTTTCTCTAGACATTATCATCTCCTATATCTATATTATGGTCTTACTGAAATATCTTTTGTCCATTGTGCATTTAAAGTTTCGGCCTAAAAAATAA AGTATGAAATATACTGCATTGACTTTTGTATTGGTCTGTGGTACTATTTGATAGATGTTGTTCTTCCTTACTTGTATCTTAGCTGATTGGTGGTGTCATT TAATATGA
• Tissue: pods
• Gene name: LI_gene_176942;
• Additional information: details;

Expression of Ll_transcript_344202

FPKM

• PAB: 0
• PNAB: 0.7
• PS1: 0.6
• PS2: 0.8
• PS3: 0.4
• PW1: 0.4
• PW2: 0.3
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_344202

• Blastp: Probable inactive histone-lysine N-methyltransferase SUVR2 from Arabidopsis with 38.5% of identity
• Blastx: Histone-lysine N-methyltransferase SUVR4 from Arabidopsis with 53.82% of identity
• Eggnog: Histone-lysine N-methyltransferase(COG2940)
• Kegg: Link to kegg annotations (AT5G43990)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019429978.1)
• Pfam: Ubiquitin-binding WIYLD domain (PF10440.8)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;