Ll_transcript_344206

• Id Trinity: TRINITY_DN50401_c1_g2_i16
• Name Transcript: Ll_transcript_344206
• Sequence: TTCTGTCTCTAAAACCTAAAAACATTGCAACTGAAAATGGTGCAGTGAGTGAATGTGAAACCCAACAAGTTAGGTAGAAGCATCAAATGGTTGCTCATTT TCAAATTCCCATGTAAGCAAACGGTTCTTGTATGGTTCCGAAATAATCAAAGAGAATTGCGAATCCCAGTTCTCTTTGATTTGTTCATTACAAGAGGTGT GTTTGCTGGTATACATGGTTGAAACACACACCATATCTCGTCGTTGAGGTGGACATTGTTCTCGCAGTGCACCGACTTCTTTTCGCGAGCACTTGACATC TGTTACCTTGGCAAATTATCTCCAGATCTGCTTGATACACCTTTACAATACCTACTTCAAACTGTGTGTTGCACGATTTCTAAATTCAATTTCAAAACTT GATGACATTTAAGTACTGTTTGTTGTGATTATTAGGAAGTTGGGTAGTTGCTATTTCTATAATCTTCCCCGCCACTTGCTTTCTAAGTTAGTACAATAAA GAATGTCGAGGAGTGCTAGCTTAATTTATCATAATTCATATATTGTACTTTCCCATCTCAGAATTCTCTGAAGTTTAATTCTGTGGGGGGAGCATGTAGC AGAAGTAACTGCTGGCTGATCATAAATGGCACCCAATCCAAGAGTAGTAGCGGCCTGTGATGCAATGGCAAATCTTGGGATTCATGTATCAAAAGTGAAG CCAGTACTAAAGAAACTCCTGAAATTGTATGATAAGAACTGGGAACTTATTGAAGAAGAGAACTATAGAGCTCTAGCAGATGCAATATTTGATGTGGATG AAGATAAGGTACCAGAGGTTCATATAAAGAAAAACAAGAGAGTTGATGAAGGAGGGGCAGATGATGAAGAAGCTCATCTGCATGATGAGCCATTGCAACC TTTGAAGAGATCACGTTTAAGAAGACAAGAGGCTCAATCTTCACATCCGCTGAGTAGCTCTGGCCCCAGCTCAGCTGCCTGTTCATTGAAAATACCTAAA CTAGAAGATGGGATAGTACCTGAGAGTAGTTCTGAACCGCAGCATCGAAGCACGACAGTGTTATCAGATGGAAATGCACGAAATGAAACACATCAACTTC CACCACGAGATGGCATTGTTGACAAGGGAGAGCAACCTGTATCACCTCATGTTACTTATAGAAGGAGAAGGTTTACATCTGAAAGAGCAACCCCAGCAGT GCCCTTGATCATACCCAAGGATGAGCCTATCAATGACTTGCCAGATTTTGTATTTCCCCTTACAATGATTCTTCCTGAACAATCAAGAAGAAGGGACTCT TCAATTAATAATGGTGCAGCTGAAAAGCAAGATGGCCATGACACAGTGGGGTTGCCATGCAGAGATAGAGAAGTTGGAGCTCAAGATATTCTTCCTTCCT CACATAACGAAGTGGCTTCTAATGTTGAGATAGCCTCTCCGGCTGTGGGAGAGGTAACTGCAGCTGAAAAGCAAGATGGCCATGACACAGTGGCATTGCA ATGCAGGGATGGAGAAGTTGGAGGTGAAGATATTCTTCCTTCCTCACATGAAGAAGCAGATCCTAATGTTGAGATAAACTCGCCTGCTATGGGGGAGGAA GGACCTGCAATGATAACACCAACTGTTAACATGTCAATGGAGCCTGGGGAATTTGAGCCCCTGCTTGTCGAAGGAAATGAAGATTCTGTTATGCCTTGCA TTTCAAATGGATCAATCGATGATATGTCTTCTGCTGACTTGGTGGCACCTCAAATTTGTAGTTCCAAACCCTGCCCAAGTGGTCTGGGTGATGCTGTATT GCTTTCCAAGAAGTTTGGAACTAATGATTTCATAGAAAGTGATGATGGAGCAAAGTTGGTGTGTGTTGTGAGTCCTAATTCACCCAGTTTAACACTTGTT CCAGAGCATCATCCTTCAAGTGAAATGAAGACTTCTCAAGATGTTAATGACCTAATGAAGGGAGAAGAAAATGTGAAAATTTCATGGGTGAATAATACTA GTACCGATTGCCCACCACCCTTCCACTACATACACCGAAGTGTTGTGTTCCGAGATGCTCATGTCAAGATTTCTCTATCTCGTATTGGAAATGAGGATTG TTGTTCAACTTGTATGGGCAATTGTGTATTGTCATCAAAACCATGTTTTTGTACAAATAAAACTGGGGGTGAATTTGCATATACTGCACAAGGCCTACTG AAGGAAGAGTTCTTGAAAGATTGTATTGCCATCAGCCACCACCCTCAACATTATTTTTATTGCAAAGACTGCCCACTTGAAAGATCAATGAGTGATGGTT GTTTAGAACCATGTAAAGGACATTTAAAGAGGAAGTTTATTAAAGAGTGCTGGAGCAAATGTGGTTGCGGGAAACAATGTGGCAATCGTGTTATTCAGCG AGGAATAACTTGCAAATTGGAGGTGTTTTTAACATCAGACGGAAAAGGGTGGGGTCTTCGCACCTTGGAGGACCTTCCACAAGGGGCATTTGTATGTGAG TTTGTTGGAGAAATTTTAACTGTCAAAGAGTTGCATGGAAGGAACACCAAATATCCCAAAACTGGGAAACATACCTGCCCAATTCTATTAGATGCAAATT GGGATTCAGGAGTTATGGAGGATAAAAAAGCTCTTTGCTTGGATGCAGGATCATATGGAAATGCTGCAAGGTTCATTAATCACAGATGTTTTGATGCAAA CTTGGTTGAGATCCCAGTTGAAGTTGAGTGCCCCGATCATAACTACTATCATCTTGCCTTCTTCACATCCAGAGAAATAGCTGCACAAGAAGAGCTTACT TGGGATTATGGCATCAACTTTGATGACCAAGATCAACCTGTTGAGCTGTTCCAGTGCAAATGTGGCAGTAAATTCTGCAGGAACATGAAACGATCAAATA GATCCACTAGATCATCAATTGCAAGATGATAGCAATCATCTGCCAAACCAATTTTTCTGTCTGAACATGCCATGGATGAGTTGTAACAAGACCCGTCTCA CTGAATTATTTTCTTTTTCATATTGGTTTGCTCTGAATTTCTAGAGTCAGTTACTTTGTTCAGCCATGTGAGAACTATTTTGCAGTCATCATAGCCCAAA ACACAAAGAAAATGGTTAATAACCTATAGACAGTAGCAAATCTGAATCTTTGGTGTTTTACTGCAACATCCTGGGGGTTTCTTGAATGCCAAAGGACATG TGTGTCCGGGATTTTATTTTGTGCTCAATGCATGACAGATTAACTGTTGACACATTTTTCCTGTGTTTTTTTTTTTGTATTACCAAGGGT
• Tissue: pods
• Gene name: LI_gene_176942;
• Additional information: details;

Expression of Ll_transcript_344206

FPKM

• PAB: 0
• PNAB: 0.2
• PS1: 0.2
• PS2: 0.7
• PS3: 0
• PW1: 0.3
• PW2: 0
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_344206

• Blastp: Probable inactive histone-lysine N-methyltransferase SUVR2 from Arabidopsis with 38.32% of identity
• Blastx: Histone-lysine N-methyltransferase SUVR4 from Arabidopsis with 50.86% of identity
• Eggnog: Histone-lysine N-methyltransferase(COG2940)
• Kegg: Link to kegg annotations (AT5G43990)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019429978.1)
• Pfam: Ubiquitin-binding WIYLD domain (PF10440.8)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;