Id Trinity | TRINITY_DN50401_c1_g2_i21 |
---|---|
Name Transcript | Ll_transcript_344211 |
Sequence | ATTTTTTTTCTTGTTAGAAAATTTCACCAAACATTAGATTCTAGATTCCTTGAACCAAACACCACTAAAGCTAATGAAATTGATGATTTCAATTCCATTC CACCCAACTCCACAATCATCAATCACCTGGGTTTGACTCATCACTCATTTTTATGCTCTCTCTCTATATATAACCTAAAAATCATAGCTTTAAAGAGAAA TTCGTGAATGCATAACGCAGCAAGGCGAAATCTTTAAACCCAGTGAGGTGTGTTTGCTGGTATACATAGTTGAAACACACACCATATCTCGTACTCTCAT TGTTGAGGTGGACATTGTTGCTGTTGTGCATCTACTTCTTTTCGCCAGCACCAGACACCAGTTACTTTGGAAAATCATCTGCAGCAGAAGTAACTGTTGG CTGATCATAAATGGCACGTAATCCAAAAGTGGTAGCAGCCTATAGCGCAATGGCAAATCTTGGGATTCATGTATCAAAAGTGAAGCCAGTACTAAAGAAA CTTCTTAAGTTGTATGATAAGAACTGGGAACTGATTGAAGAAGAGAACTATAGAGCTCTGGCAGATGCAATATTTGAGGAGGATGAAAATAAGGTACCAG AGTCGGAGCCGGAGCCGGTTCATAAAAAGAAAAACAAGAGAGTCGATGAAGGAAGGGCAGATGATGAAGAAGCTCATCTGCATGATGAGCCATTGCAACC TTTGAAGAGGTCACGTTTAAGAGGACAAGAGACCCAATCTTTGCATCCTTCGACTAGCTCTGGTCCCAGCTCAGCTGCCTATCCATTGAAAGTTCCTAAA TTAGAAGATGGGACAGTACCTGAAAGTAGTAACGGACGGCAGCATCAAAACACAGCAGTTTTATCTGATGGAAATGCTCAAAACGAAACAAACCAACTTC CACCACGTGATGGTATTGTTGACAAGGGAAAGCAACCTGTATCACCTAATGTTACTTATAGAAGGAGAAGGCTTACATCTGAAAGAGCAGCCCCAGCAGT ACCCTTGATCATACCAAAGGATGAGCCCATTGATGACATGCCACAGTTTGCAGTCCCCGTTACAATGATTCTTCCTGAACAATCAAGTGGAATGGACTCT TCAATTAATAATGGTGCAGCTGAAAAGCAAGATGGCCATGACACAGTGCCATTGCCATGCAGAGATGGCGAAGTTAGAGCACATGATATTCTTCCTTCCT CGCATGAAGAAGTGCCTTCTAATGTTGAGATAGCTTCGTCAGCTGTGGGAGAGGTAACTGCAGATGAAAAGCAAGACGGGCATGATACAGTGGCGCTGCC ATGCAGAGATGGAGAAGTTGGAGCTCAAGATATTCCTTCCTCACATGAAGAAGTGCCTTCTAATGTTAAGATAGCTTCGTCAGCTGTCGGAGAGGTAACT GCAGCTGAAAAGCAAGATGGCCATGACACAGTGGCATTGCATTGCAGAGATGGAGAAATTGGAGGTGAAGATATTCTTCTTTCTTCGCATAAAGAAGCAG CTTCTAATGTTGAGATAAACTTGTCTGCTATGGGAGAGGAAGGGTCTGTTAAGATAACACCATCTGTTAACGTGTCAATGGAGCCTGGGGAATTCGAGAC CCTGCTTGTCGAAGGAAATAAAGATTCTGCGAGGCCTCACATTTCAAATGGATCGACCAATGATATATCTTCTGCTGACTTGGTGGCACCACAAATTCCT GATTCTAAACCGTACCCAAGTGGTCTGGATGATGCTGTACCAGTTTCCAAGAAGGTTGTAACTAATGATTTCATTGAAAGTGATGTTGGAAAGGAGTTGG TGGATGTTGTATATCCTAATTCACCCAGTTTAACGCTTGTTTCAAAGCATCATCCTACAACTGAAATAAGGATTTGTCAAGATGTTAATGACCTAACGAA GGGAGAAGAGAATGTGAAAATTTCATGGGTGAATAATACAAGTTCTGATTGCCCACCACCCTTTCACTATGTACGCCGAAGTGTTGTGTTCCGAGATGCT CATGTCAAGATTTCTCTATCTCGTATTGGAAATGAGGATTGTTGTTCAACTTGTATGGGCAATTGTGTATTGTCATCAAAACCATGTTTTTGTACAAATA AAACTGGGGGTGAATTTGCATATACTGCACAAGGCCTACTGAAGGAAGAGTTCTTGAAAGATTGTATTGCCATCAGCCACCACCCTCAACATTATTTTTA TTGCAAAGACTGCCCACTTGAAAGATCAATGAGTGATGGTTGTTTAGAACCATGTAAAGGACATTTAAAGAGGAAGTTTATTAAAGAGTGCTGGAGCAAA TGTGGCTGTAGGAAACAGTGTGGCAATCGTGTTGTCCAGAGAGGAATAACTTGCAAATTGGAGGTGTTTTTAACTGCAGAAGGAAAAGGGTGGGGTCTTC GCACCTTGGAGGACCTTCCACAAGGGGCATTTGTATGTGAATTTGTTGGAGAAATTTTAACTGTCAAAGAGTTGCATGGGAGGACCTTGAAATATCCCAA AACTGGGAAATGTCCCTACCCAATTCTGTTGGATGCAAATTGGGATTCAGGAGTTGTGAAGGATAAAGAAGCTCTTTGCTTGGATGCAGGATCATATGGA AATGCTGCAAGGTTCATTAATCACAGATGTTTTGATGCAAACTTGGTTGAGATCCCAGTTGAAGTTGAGTGCCCTGATCATCAGTACTATCATCTTGCCT TCTTCACATCCAGAGAAGTAGTTGCGCAGGAAGAGCTTACATGGGTGTGTGGATTTGCTTATGTAATATATTGTTTGGTGAATGGTCCTATGGCATTACT TGCTTCTGTTTTTTTATTAGTGCCTATTAATTACTATATATTCACAACTTGGCACAATTAGTAACGACAAAACAAGGTTGAGATATTAATCATGGCTGAA TTAAATTTTTATTGGCTACTAAATTAAAAATGGCTATGTGCACTGGTTGCTTCACATTTTGTAGAGTGTAGACCATGTTACTTTTATACTGACTACTCAG CATCTTTATAGCTTCTAGTTTTTGTGTACTTTACTTTCTTTATGTTATTTAGCTGTTGACTTTTTTCTGTCTGAAAAAGCTTGTATGCATGGTGTTTTTG CAGGATTATGGCATAAACTTTGATGACCAAGATCAGCCTGTTGAGCTGTTCCAGTGCAGATGTGGCAGTAAATTCTGCAGGAATATGAAACGGTCAAATA GGTCCACTAGATCATCAATTGAAAGATGATAGCCATTATCTGTTGAAATTTGTTTCATGCCAGACAATGCCATGGAGGAGTTGTGACAAGACCAAACTCA ATGAATTAGTCTCTTTTTCTTATTGTTTTGCTAACTTTGTTCAGCCATCTGAGAATTTTTATGCAGACATAGCCAAAAAAACAAGATAACCTTTAGTGGG TAGCAAATCTGAACCTTTGGTGGAGGGGTTTATTGAAACGCCCAAGGATATTTGTGTTTGGACTTTGGAATTCCATGTTGTCCTCAATGCATGACACACT AATTGTTAACAACACTTTTTTTGGTTTTGTTGTATATGTTATTATTGAAAGGTAGAAAAGGTAATAGCCCATTTTGGTATTTGCTAGGATGAGAAATGAG AGCAACTAAATAAAGTGGTGTCCCTTCCCAAAATAAAAGCTTCAAGTTAACAACAAAAAGGGAGAATGGAAAAAGATGCCAATAGAGTATAAATCATTTC AACTCAACTCATTAGTAACTGCTTATTAGCACCAATTTTTCCATTATGGGATTGCAATTGATGCTGATCTAGTTGATCTTGCATCATGATTCATGCATGA TTGGGTAAAAGGAAGTTAATAAATAACTAAGTTGACAGAAACTCATAACGGGCCTTGTGTTAGAGAGTTATAAAGTGGTCTGATGGTGGTCGTAAAGACC AGAGTGCAGGAGGTTGTGGGTTTGAGGAGGTTGAGGTGATATATCACCACAACAAATTATTAACGTACTAACATTTACATTCTAAAAAATTGTCGATAAA AAAAAAAAGACGGGCCA BLAST |
Tissue | pods |
Gene name | LI_gene_176942; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_344211
Blastp | Histone-lysine N-methyltransferase SUVR4 from Arabidopsis with 55.17% of identity |
---|---|
Blastx | Histone-lysine N-methyltransferase SUVR4 from Arabidopsis with 55.17% of identity |
Eggnog | Histone-lysine N-methyltransferase(COG2940) |
Kegg | Link to kegg annotations (AT3G04380) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019429978.1) |
Pfam | Ubiquitin-binding WIYLD domain (PF10440.8) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |