Ll_transcript_344212

• Id Trinity: TRINITY_DN50401_c1_g2_i22
• Name Transcript: Ll_transcript_344212
• Sequence: ATTTTTTTTCTTGTTAGAAAATTTCACCAAACATTAGATTCTAGATTCCTTGAACCAAACACCACTAAAGCTAATGAAATTGATGATTTCAATTCCATTC CACCCAACTCCACAATCATCAATCACCTGGGTTTGACTCATCACTCATTTTTATGCTCTCTCTCTATATATAACCTAAAAATCATAGCTTTAAAGAGAAA TTCGTGAATGCATAACGCAGCAAGGCGAAATCTTTAAACCCAGTGAGGTGTGTTTGCTGGTATACATAGTTGAAACACACACCATATCTCGTACTCTCAT TGTTGAGGTGGACATTGTTGCTGTTGTGCATCTACTTCTTTTCGCCAGCACCAGACACCAGTTACTTTGGAAAATCATCTGCAGCAGAAGTAACTGTTGG CTGATCATAAATGGCACGTAATCCAAAAGTGGTAGCAGCCTATAGCGCAATGGCAAATCTTGGGATTCATGTATCAAAAGTGAAGCCAGTACTAAAGAAA CTTCTTAAGTTGTATGATAAGAACTGGGAACTGATTGAAGAAGAGAACTATAGAGCTCTGGCAGATGCAATATTTGAGGAGGATGAAAATAAGGTACCAG AGTCGGAGCCGGAGCCGGTTCATAAAAAGAAAAACAAGAGAGTCGATGAAGGAAGGGCAGATGATGAAGAAGCTCATCTGCATGATGAGCCATTGCAACC TTTGAAGAGGTCACGTTTAAGAGGACAAGAGACCCAATCTTTGCATCCTTCGACTAGCTCTGGTCCCAGCTCAGCTGCCTATCCATTGAAAGTTCCTAAA TTAGAAGATGGGACAGTACCTGAAAGTAGTAACGGACGGCAGCATCAAAACACAGCAGTTTTATCTGATGGAAATGCTCAAAACGAAACAAACCAACTTC CACCACGTGATGGTATTGTTGACAAGGGAAAGCAACCTGTATCACCTAATGTTACTTATAGAAGGAGAAGGCTTACATCTGAAAGAGCAGCCCCAGCAGT ACCCTTGATCATACCAAAGGATGAGCCCATTGATGACATGCCACAGTTTGCAGTCCCCGTTACAATGATTCTTCCTGAACAATCAAGTGGAATGGACTCT TCAATTAATAATGGTGCAGCTGAAAAGCAAGATGGCCATGACACAGTGCCATTGCCATGCAGAGATGGCGAAGTTAGAGCACATGATATTCTTCCTTCCT CGCATGAAGAAGTGCCTTCTAATGTTGAGATAGCTTCGTCAGCTGTGGGAGAGGTAACTGCAGATGAAAAGCAAGACGGGCATGATACAGTGGCGCTGCC ATGCAGAGATGGAGAAGTTGGAGCTCAAGATATTCCTTCCTCACATGAAGAAGTGCCTTCTAATGTTAAGATAGCTTCGTCAGCTGTCGGAGAGGTAACT GCAGCTGAAAAGCAAGATGGCCATGACACAGTGGCATTGCATTGCAGAGATGGAGAAATTGGAGGTGAAGATATTCTTCTTTCTTCGCATAAAGAAGCAG CTTCTAATGTTGAGATAAACTTGTCTGCTATGGGAGAGGAAGGGTCTGTTAAGATAACACCATCTGTTAACGTGTCAATGGAGCCTGGGGAATTCGAGAC CCTGCTTGTCGAAGGAAATAAAGATTCTGCGAGGCCTCACATTTCAAATGGATCGACCAATGATATATCTTCTGCTGACTTGGTGGCACCACAAATTCCT GATTCTAAACCGTACCCAAGTGGTCTGGATGATGCTGTACCAGTTTCCAAGAAGGTTGTAACTAATGATTTCATTGAAAGTGATGTTGGAAAGGAGTTGG TGGATGTTGTATATCCTAATTCACCCAGTTTAACGCTTGTTTCAAAGCATCATCCTACAACTGAAATAAGGATTTGTCAAGATGTTAATGACCTAACGAA GGGAGAAGAGAATGTGAAAATTTCATGGGTGAATAATACAAGTTCTGATTGCCCACCACCCTTTCACTATGTACGCCGAAGTGTTGTGTTCCGAGATGCT CATGTCAAGATTTCTCTATCTCGTATTGGAAATGAGGATTGTTGTTCAACTTGTATGGGCAATTGTGTATTGTCATCAAAACCATGTTTTTGTACAAATA AAACTGGGGGTGAATTTGCATATACTGCACAAGGCCTACTGAAGGAAGAGTTCTTGAAAGATTGTATTGCCATCAGCCACCACCCTCAACATTATTTTTA TTGCAAAGACTGCCCACTTGAAAGATCAATGAGTGATGGTTGTTTAGAACCATGTAAAGGACATTTAAAGAGGAAGTTTATTAAAGAGTGCTGGAGCAAA TGTGGTTGCGGGAAACAATGTGGCAATCGTGTTATTCAGCGAGGAATAACTTGCAAATTGGAGGTGTTTTTAACATCAGACGGAAAAGGGTGGGGTCTTC GCACCTTGGAGGACCTTCCACAAGGGGCATTTGTATGTGAGTTTGTTGGAGAAATTTTAACTGTCAAAGAGTTGCATGGAAGGAACACCAAATATCCCAA AACTGGGAAACATACCTGCCCAATTCTATTAGATGCAAATTGGGATTCAGGAGTTATGGAGGATAAAAAAGCTCTTTGCTTGGATGCAGGATCATATGGA AATGCTGCAAGGTTCATTAATCACAGATGTTTTGATGCAAACTTGGTTGAGATCCCAGTTGAAGTTGAGTGCCCCGATCATAACTACTATCATCTTGCCT TCTTCACATCCAGAGAAATAGCTGCACAAGAAGAGCTTACTTGGGATTATGGCATCAACTTTGATGACCAAGATCAACCTGTTGAGCTGTTCCAGTGCAA ATGTGGCAGTAAATTCTGCAGGAACATGAAACGATCAAATAGATCCACTAGATCATCAATTGCAAGATGATAGCAATCATCTGCCAAACCAATTTTTCTG TCTGAACATGCCATGGATGAGTTGTAACAAGACCCGTCTCACTGAATTATTTTCTTTTTCATATTGGTTTGCTCTGAATTTCTAGAGTCAGTTACTTTGT TCAGCCATGTGAGAACTATTTTGCAGTCATCATAGCCCAAAACACAAAGAAAATGGTTAATAACCTATAGACAGTAGCAAATCTGAATCTTTGGTGTTTT ACTGCAACATCCTGGGGGTTTCTTGAATGCCAAAGGACATGTGTGTCCGGGATTTTATTTTGTGCTCAATGCATGACAGATTAACTGTTGACACATTTTT CCTGTGTTTTTTTTTTTGTATTACCAAGGGT
• Tissue: pods
• Gene name: LI_gene_176942;
• Additional information: details;

Expression of Ll_transcript_344212

FPKM

• PAB: 0.1
• PNAB: 4.8
• PS1: 8.2
• PS2: 8.2
• PS3: 10.1
• PW1: 2
• PW2: 2.8
• PW3: 1.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_344212

• Blastp: Histone-lysine N-methyltransferase SUVR4 from Arabidopsis with 53.92% of identity
• Blastx: Histone-lysine N-methyltransferase SUVR4 from Arabidopsis with 53.92% of identity
• Eggnog: Histone-lysine N-methyltransferase(COG2940)
• Kegg: Link to kegg annotations (AT3G04380)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019429978.1)
• Pfam: Ubiquitin-binding WIYLD domain (PF10440.8)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;