Id Trinity | TRINITY_DN50401_c1_g2_i3 |
---|---|
Name Transcript | Ll_transcript_344191 |
Sequence | TTCTGTCTCTAAAACCTAAAAACATTGCAACTGAAAATGGTGCAGTGAGTGAATGTGAAACCCAACAAGGTTCAAACCCACATTTCACCATCACATTCTC ACTTCTTTTGGTTCACTTTCTGCTTTTTACTAATCTTTATCTTTTTATTTATTTATTTATTTATCGCTCAGTGTTAACTCTTTGTTTTACATGATAGATC ATAATTTATTGACTCGGAGACAAAAAGCATGTGGAGTTTTTCATAAAAAAAATTGTAACTTTTGAAAATGTAGATTGTAGCCTTTGAAAGCTAGCTTATT TCAGAAGCTATAAGCTGTTTCAATAGTGAATGTCTCATTTTGTCCTTCAATTTTAAGTCAATGTAATATTACATGCCCTTTTAACTTTTAAGTCATCAGC TAGTTGCAAAATTGATTTTACTCATTTTACCAAACAATTCTAATTCAATACGCTCGCTACACAAGTGAAACCCTTCACCTAGCTTCATCTCTATAAGGCT ATAAGCTACAATTCTAATTCAATAAGTTACTTTTGCCAAAGAAAACCTTAGTAGGTGTAAACTTCAGTGTTTATTCTTCTTCCCAAACAAGGTTTTAGAT TCATGGTAATTGTTGCGGTTGTGGTTATGCTACGTTTATCGTAATAGTAGACAGAATGCTTTTTTAGATATGTTCTGTTATTGTTCATGTGCTTTAATTT AATTACTGGGTTTCTCTTCAATGAGTTCTTATTTTTTCACTCAATTCAGTGTCAGGGTCAGTGAATTTGCATTTACCTGTCTTTTTGTTATGGCAGTTAG GTAGAAGCATCAAATGGTTGCTCATTTTCAAATTCCCATGTAAGCAAACGGTTCTTGTATGGTTCCGAAATAATCAAAGAGAATTGCGAATCCCAGTTCT CTTTGATTTGTTCATTACAAGAGGTGTGTTTGCTGGTATACATGGTTGAAACACACACCATATCTCGTCGTTGAGGTGGACATTGTTCTCGCAGTGCACC GACTTCTTTTCGCGAGCACTTGACATCTGTTACCTTGGCAAATTATCTCCAGATCTGCTTGATACACCTTTACAATACCTACTTCAAACTGTGTGTTGCA CGATTTCTAAATTCAATTTCAAAACTTGATGACATTTAAGTACTGTTTGTTGTGATTATTAGGAAGTTGGGTAGTTGCTATTTCTATAATCTTCCCCGCC ACTTGCTTTCTAAGTTAGTACAATAAAGAATGTCGAGGAGTGCTAGCTTAATTTATCATAATTCATATATTGTACTTTCCCATCTCAGAATTCTCTGAAG TTTAATTCTGTGGGGGGAGCATGTAGCAGAAGTAACTGCTGGCTGATCATAAATGGCACCCAATCCAAGAGTAGTAGCGGCCTGTGATGCAATGGCAAAT CTTGGGATTCATGTATCAAAAGTGAAGCCAGTACTAAAGAAACTCCTGAAATTGTATGATAAGAACTGGGAACTTATTGAAGAAGAGAACTATAGAGCTC TAGCAGATGCAATATTTGATGTGGATGAAGATAAGGTACCAGAGGTTCATATAAAGAAAAACAAGAGAGTTGATGAAGGAGGGGCAGATGATGAAGAAGC TCATCTGCATGATGAGCCATTGCAACCTTTGAAGAGATCACGTTTAAGAAGACAAGAGGCTCAATCTTCACATCCGCTGAGTAGCTCTGGCCCCAGCTCA GCTGCCTGTTCATTGAAAATACCTAAACTAGAAGATGGGATAGTACCTGAGAGTAGTTCTGAACCGCAGCATCGAAGCACGACAGTGTTATCAGATGGAA ATGCACGAAATGAAACACATCAACTTCCACCACGAGATGGCATTGTTGACAAGGGAGAGCAACCTGTATCACCTCATGTTACTTATAGAAGGAGAAGGTT TACATCTGAAAGAGCAACCCCAGCAGTGCCCTTGATCATACCCAAGGATGAGCCTATCAATGACTTGCCAGATTTTGTATTTCCCCTTACAATGATTCTT CCTGAACAATCAAGAAGAAGGGACTCTTCAATTAATAATGGTGCAGCTGAAAAGCAAGATGGCCATGACACAGTGGGGTTGCCATGCAGAGATAGAGAAG TTGGAGCTCAAGATATTCTTCCTTCCTCACATAACGAAGTGGCTTCTAATGTTGAGATAGCCTCTCCGGCTGTGGGAGAGGTAACTGCAGCTGAAAAGCA AGATGGCCATGACACAGTGGCATTGCAATGCAGGGATGGAGAAGTTGGAGGTGAAGATATTCTTCCTTCCTCACATGAAGAAGCAGATCCTAATGTTGAG ATAAACTCGCCTGCTATGGGGGAGGAAGGACCTGCAATGATAACACCAACTGTTAACATGTCAATGGAGCCTGGGGAATTTGAGCCCCTGCTTGTCGAAG GAAATGAAGATTCTGTTATGCCTTGCATTTCAAATGGATCAATCGATGATATGTCTTCTGCTGACTTGGTGGCACCTCAAATTTGTAGTTCCAAACCCTG CCCAAGTGGTCTGGGTGATGCTGTATTGCTTTCCAAGAAGTTTGGAACTAATGATTTCATAGAAAGTGATGATGGAGCAAAGTTGGTGTGTGTTGTGAGT CCTAATTCACCCAGTTTAACACTTGTTCCAGAGCATCATCCTTCAAGTGAAATGAAGACTTCTCAAGATGTTAATGACCTAATGAAGGGAGAAGAAAATG TGAAAATTTCATGGGTGAATAATACTAGTACCGATTGCCCACCACCCTTCCACTACATACACCGAAGTGTTGTGTTCCGAGATGCTCATGTCAAGATTTC TCTATCTCGTATTGGAAATGAGGATTGTTGTTCCACTTGTATGGGAAATTGTGTGTTGTCATCAAAACCATGTTTTTGTGCAAATAACACTGGAGGTGAA TTTGCATACAATGCAGAAGGCCTACTGAAGGAAGAGTTCTTGAAAGAGTGTATTTCCATCAGCCACCACCCTCAACATTATTTTTATTGCAAAGACTGCC CACTTGAAAGATCAATGAGTGATGGTTGTTTAGAACCATGTAAAGGACATTTAAAGAGGAAGTTTATTAAAGAGTGCTGGAGCAAATGTGGCTGTAGGAA ACAGTGTGGCAATCGTGTTGTCCAGAGAGGAATAACTTGCAAATTGGAGGTGTTTTTAACTGCAGAAGGAAAAGGGTGGGGTCTTCGCACCTTGGAGGAC CTTCCACAAGGGGCATTTGTATGTGAATTTGTTGGAGAAATTTTAACTGTCAAAGAGTTGCATGGGAGGACCTTGAAATATCCCAAAACTGGGAAATGTC CCTACCCAATTCTGTTGGATGCAAATTGGGATTCAGGAGTTGTGAAGGATAAAGAAGCTCTTTGCTTGGATGCAGGATCATATGGAAATGCTGCAAGGTT CATTAATCACAGATGTTTTGATGCAAACTTGGTTGAGATCCCAGTTGAAGTTGAGTGCCCTGATCATCAGTACTATCATGTGAGACATTAGCAAATCCTC AAAGTTCTGTCTACAGTTTTTAATTAATATTGTTGGCAAGACAGACTCTAATATTCTGTAGAAAACATTGCATACTGATGCTTTTAATATGTAAAAATGT GCAGCTTGCCTTCTTCACATCCAGAGAAGTAGTTGCGCAGGAAGAGCTTACATGGGTGTGTGGATTTGCTTATGTAATATATTGTTTGGTGAATGGTCCT ATGGCATTACTTGCTTCTGTTTTTTTATTAGTGCCTATTAATTACTATATATTCACAACTTGGCACAATTAGTAACGACAAAACAAGGTTGAGATATTAA TCATGGCTGAATTAAATTTTTATTGGCTACTAAATTAAAAATGGCTATGTGCACTGGTTGCTTCACATTTTGTAGAGTGTAGACCATGTTACTTTTATAC TGACTACTCAGCATCTTTATAGCTTCTAGTTTTTGTGTACTTTACTTTCTTTATGTTATTTAGCTGTTGACTTTTTTCTGTCTGAAAAAGCTTGTATGCA TGGTGTTTTTGCAGGATTATGGCATAAACTTTGATGACCAAGATCAGCCTGTTGAGCTGTTCCAGTGCAGATGTGGCAGTAAATTCTGCAGGAATATGAA ACGGTCAAATAGGTCCACTAGATCATCAATTGAAAGATGATAGCCATTATCTGTTGAAATTTGTTTCATGCCAGACAATGCCATGGAGGAGTTGTGACAA GACCAAACTCAATGAATTAGTCTCTTTTTCTTATTGTTTTGCTAACTTTGTTCAGCCATCTGAGAATTTTTATGCAGACATAGCCAAAAAAACAAGATAA CCTTTAGTGGGTAGCAAATCTGAACCTTTGGTGGAGGGGTTTATTGAAACGCCCAAGGATATTTGTGTTTGGACTTTGGAATTCCATGTTGTCCTCAATG CATGACACACTAATTGTTAACAACACTTTTTTTGGTTTTGTTGTATATGTTATTATTGAAAGGTAGAAAAGGTAATAGCCCATTTTGGTATTTGCTAGGA TGAGAAATGAGAGCAACTAAATAAAGTGGTGTCCCTTCCCAAAATAAAAGCTTCAAGTTAACAACAAAAAGGGAGAATGGAAAAAGATGCCAATAGAGTA TAAATCATTTCAACTCAACTCATTAGTAACTGCTTATTAGCACCAATTTTTCCATTATGGGATTGCAATTGATGCTGATCTAGTTGATCTTGCATCATGA TTCATGCATGATTGGGTAAAAGGAAGTTAATAAATAACTAAGTTGACAGAAACTCATAACGGGCCTTGTGTTAGAGAGTTATAAAGTGGTCTGATGGTGG TCGTAAAGACCAGAGTGCAGGAGGTTGTGGGTTTGAGGAGGTTGAGGTGATATATCACCACAACAAATTATTAACGTACTAACATTTACATTCTAAAAAA TTGTCGATAAAAAAAAAAAGACGGGCCA BLAST |
Tissue | pods |
Gene name | LI_gene_176942; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_344191
Blastp | Probable inactive histone-lysine N-methyltransferase SUVR2 from Arabidopsis with 37.08% of identity |
---|---|
Blastx | Histone-lysine N-methyltransferase SUVR4 from Arabidopsis with 51.16% of identity |
Eggnog | Histone-lysine N-methyltransferase(COG2940) |
Kegg | Link to kegg annotations (AT5G43990) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019429978.1) |
Pfam | Ubiquitin-binding WIYLD domain (PF10440.8) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |