| Id Trinity | TRINITY_DN50401_c1_g2_i8 |
|---|---|
| Name Transcript | Ll_transcript_344196 |
| Sequence | TTCTGTCTCTAAAACCTAAAAACATTGCAACTGAAAATGGTGCAGTGAGTGAATGTGAAACCCAACAAGTTAGGTAGAAGCATCAAATGGTTGCTCATTT TCAAATTCCCATAATTCTCTGAAGTTTAATTCTGTGGGGGGAGCATGTAGCAGAAGTAACTGCTGGCTGATCATAAATGGCACCCAATCCAAGAGTAGTA GCGGCCTGTGATGCAATGGCAAATCTTGGGATTCATGTATCAAAAGTGAAGCCAGTACTAAAGAAACTCCTGAAATTGTATGATAAGAACTGGGAACTTA TTGAAGAAGAGAACTATAGAGCTCTAGCAGATGCAATATTTGATGTGGATGAAGATAAGGTACCAGAGGTTCATATAAAGAAAAACAAGAGAGTTGATGA AGGAGGGGCAGATGATGAAGAAGCTCATCTGCATGATGAGCCATTGCAACCTTTGAAGAGATCACGTTTAAGAAGACAAGAGGCTCAATCTTCACATCCG CTGAGTAGCTCTGGCCCCAGCTCAGCTGCCTGTTCATTGAAAATACCTAAACTAGAAGATGGGATAGTACCTGAGAGTAGTTCTGAACCGCAGCATCGAA GCACGACAGTGTTATCAGATGGAAATGCACGAAATGAAACACATCAACTTCCACCACGAGATGGCATTGTTGACAAGGGAGAGCAACCTGTATCACCTCA TGTTACTTATAGAAGGAGAAGGTTTACATCTGAAAGAGCAACCCCAGCAGTGCCCTTGATCATACCCAAGGATGAGCCTATCAATGACTTGCCAGATTTT GTATTTCCCCTTACAATGATTCTTCCTGAACAATCAAGAAGAAGGGACTCTTCAATTAATAATGGTGCAGCTGAAAAGCAAGATGGCCATGACACAGTGG GGTTGCCATGCAGAGATAGAGAAGTTGGAGCTCAAGATATTCTTCCTTCCTCACATAACGAAGTGGCTTCTAATGTTGAGATAGCCTCTCCGGCTGTGGG AGAGGTAACTGCAGCTGAAAAGCAAGATGGCCATGACACAGTGGCATTGCAATGCAGGGATGGAGAAGTTGGAGGTGAAGATATTCTTCCTTCCTCACAT GAAGAAGCAGATCCTAATGTTGAGATAAACTCGCCTGCTATGGGGGAGGAAGGACCTGCAATGATAACACCAACTGTTAACATGTCAATGGAGCCTGGGG AATTTGAGCCCCTGCTTGTCGAAGGAAATGAAGATTCTGTTATGCCTTGCATTTCAAATGGATCAATCGATGATATGTCTTCTGCTGACTTGGTGGCACC TCAAATTTGTAGTTCCAAACCCTGCCCAAGTGGTCTGGGTGATGCTGTATTGCTTTCCAAGAAGTTTGGAACTAATGATTTCATAGAAAGTGATGATGGA GCAAAGTTGGTGTGTGTTGTGAGTCCTAATTCACCCAGTTTAACACTTGTTCCAGAGCATCATCCTTCAAGTGAAATGAAGACTTCTCAAGATGTTAATG ACCTAATGAAGGGAGAAGAAAATGTGAAAATTTCATGGGTGAATAATACTAGTACCGATTGCCCACCACCCTTCCACTACATACACCGAAGTGTTGTGTT CCGAGATGCTCATGTCAAGATTTCTCTATCTCGTATTGGAAATGAGGATTGTTGTTCCACTTGTATGGGAAATTGTGTGTTGTCATCAAAACCATGTTTT TGTGCAAATAACACTGGAGGTGAATTTGCATACAATGCAGAAGGCCTACTGAAGGAAGAGTTCTTGAAAGAGTGTATTTCCATCAGCCACCACCCTCAAC ATTATTTTTATTGCAAAGACTGCCCACTTGAAAGATCAATGAGTGATGGTTGTTTAGAACCATGTAAAGGACATTTAAAGAGGAAGTTTATTAAAGAGTG CTGGAGCAAATGTGGCTGTAGGAAACAGTGTGGCAATCGTGTTGTCCAGAGAGGAATAACTTGCAAATTGGAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_176942; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_344196
| Blastp | Probable inactive histone-lysine N-methyltransferase SUVR2 from Arabidopsis with 34.02% of identity |
|---|---|
| Blastx | Probable inactive histone-lysine N-methyltransferase SUVR2 from Arabidopsis with 51.89% of identity |
| Eggnog | Histone-lysine N-methyltransferase(COG2940) |
| Kegg | Link to kegg annotations (AT5G43990) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019429978.1) |
| Pfam | Ubiquitin-binding WIYLD domain (PF10440.8) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |