Ll_transcript_344198

• Id Trinity: TRINITY_DN50401_c1_g2_i9
• Name Transcript: Ll_transcript_344198
• Sequence: GAAAAAAATCTTATTTTTGTAAACCAAATCCAATATTAATAAATTAAATCTTGTTTTTTTAATCTTTCAGAGTGAAGACTGAAGAGTTTTATTCTGTTAC CGTGTACCCTATTTCTTACAACTCTCACTCCTTTCTCATTCTTCCCTCCTCTCCTAAAATGCTCATCATTCAAAAATAAACCTTTGAAATTTAGGGGCAT TTTGTGTTTGGGAACCTGTAGTGAAAGTAACTGTTTGCTGATTAAAAATGGCACCCAATCCAAAAGTAGTAGCTGCTTTTCGGGCAATGTCAGCTCTTGG CATAACTGAGTCGCAAGTGAAACCGGTATTGAAGAAACTCCTTAAGTTGTATGATAAAAATTGGGAACTTATTGAAGAAGAGAATTATAGAGCTCTTGCA GATGCAATATTTGAGGCTGCGGAACATCCGGTGCCAGAACAGAAAAAGAAAAACAAGAATGTTCATCAAGAAGAGATGGAGGATGAAGAAGCTCAGATGC ATGCTGAGTCAGCCCAACCTTTGAAAAGGTCGCATTTAAGAGCCCAAGACGGCCAGTCTTCGAATCCTCTTACTAATAGCAGCCCAGGATCAGCCGGTTC TCCGTTAAAAAAACCTAAATTAGAAGGGGACGTATTACCTGAGAGTAATTCCAGGCAACGACCTCAAAACACAGCAGTGTCATCTGATATAAATGTGAGG ACTGACTCACGTCCAGTTCCACCACATGATGGTAATGTTGACAGAGGAAAACAACCCGTACCACCCCAAGTTGCTCCTAGACGAAGAAGGTTATTATCTG AAAGGGAAAGAGAAGCTTTATCAGCACAATCTAAAGAACCAACAGTTGAACCAGGAATGCGTCCCCTGCCAAACAACAAAATGCCTCATAGTCATGCAGT GATCATACCCAAGGATGAGCCTATTGACGAATTGCCTGATTATGCAGTTCCCATTACAGTGATTCCACCTGAACCATCAAGCATGAAGGACTCGCCAATG ATGAATGGTGCTGCACGAAAGCGAGATGGCAATGTCACCAAGGCATTATTGCAATTTAGAGATGAAGATACCCATCCTTCCTCAAATGAAGAAGCAACTT CTAATGTAGAGATAGCCTCTTCAACTATGGGAGAGGTAAAAATTTCTCTGAGATGCAGCTTTGCTGTTGGTAGACCTGAATTTCGTATGCCTAGTCAAGA TCAAATTCTACAGATGATGGAGGAAAAATGTCTGCGGTCATATAAAATCACTGACCCGAATTTTTCTGTCCCGAAACTGTTGAAAGATATATGTGATTGC ATGTTGGAATTCAGAAATGATTCAAATGATGACTCACAGAAAGAGTTTAGGACAACATCCAATGTTGATGTGATGAAGGAATCTGATGCTCATGGCATTC TAAGCGGCCGGGGGAATGAAGATCCAAACATGCTTTCTCACACTTCCAATGGATCAATCAATGTGAAGTCTTCTGCTGCCATGGTTTCACCCCGAAGTCC CTTTTCTGTAGTGGGGATGAGTGGTCTGGGTGATGCTATACAGGCTTCCCAAAAGGACAAAACAACTGATATCTTAGAAAGTAATTACAGTAAGGAGCCT GAGGATCCCATGTCTCCAAATTCACATAGTTTACCGGTTGTTCCACAGCATAATCAGCTTACAAATATTAAGTCTATTCATGATGTTAATGATCTTACAA AAGGAGAAGAAATTGTTCAAATTCCATGGGTGAATGATACTACAAATGATTTCCTGCCACCTTTTCATTATATACCCCAAAATCTTGTGTTCCGAGATGC TAATGTTAGCATTTCTCTATCTTGTATTGGGGGTGAGGACTGTTGTTCAACTTGTATGGGCAATTGTGTCCTTTTGTCTACACAATGTGCTTGTGCAGAT AAAACTGGAGCTGAATTTGCATACACTGCTGAAGGACTACTGAAGGAACATTTCTTGGAAGAGTGCATTGCCATCAGCCACAACCCTCAACAACATTACT TCTATTGCAAAGACTGCCCACTAGAAAGATATAAGGATGATGGTTGTTTAGAACCATGTAAGGGACACTTAAAGAGGAAGTTTATTAAAGAATGCTGGAC CAAATGTGGCTGTGGAAAACAGTGTGGCAATCGGGTTGTTCAACGAGGAATAACTGGCAAATTGCAGGTATTTTTCACTCCAGAAGGAAAAGGTTGGGGT CTTCGTACCTTGGAGGACCTGCCAAAAGGTGCGTTTGTGTGTGAGTTTGTTGGAGAAATTTTAACCACTGAAGAGCTGAATGAGAGAAACATGAAATGCA CTGGGAATGGGAGCTACACATACCCAATTATACTGGATGCAGATTGGGATTCAAGGTTTGTGAAGGATGAAGATGCTCTATGCTTGGATGCGGCATCTTT TGGTAACATTGCCAGGTTTATCAATCACAGATGTTCTGATGCAAACTTGGTTGAAATCCCAGTAGAAATTGAGGGCCCTGGTCACCATTACTATCATTGT GCCTTTTTCACTTCCAGAAAAATAGTCGCACAAGAGGAGCTCACTTGGGATTATGGCATTGACTTTGGTGACAGTGATCATCCTGTTAAGCTTTTCCAGT GTAGATGTGGCAGTAAATTCTGCAGGAATATGAAGCGATCAAATAGATCCAGTAGACCTGCTTCAGCTGCAAGTTCATAGTGTCTGAAATTAGGGCTTTT TGTCTCACTCATGCCTTGGATGAGTTGTAAATGAGACCCAGCCTATACTGCAATGGTGCATTTGCTTTTTGCTTTTGGGTTTGTTTTGGTGGTGGGAGCT TGTAACTTTGTACACCTTTCTGAAAACTATTGTGCAGTAATGTCCAATCATTTGCATCAAATCAAAACTGACATTGCGTTGCTGATTTTGATGTATTTAT TATTGGAGCTTGGAACTAATGCACTTGAATGCTTGAAAGACCAATATAGGTGTTCACTAACCAAACTTGGGCACTTTGGCTCAATAGTTTGGTGTTTAAC TAGTATCCTTATGTTACTGACCTTTGTTGAATCTCAATATACTATGTTTTTGATTGTGACAAATCTAGTTTTATTCAAAGTTTATTTTAGCCTAATGGGT AGGAAAATTGTGGTGTTTAATGTTGAAAGCTGGTAAAGAACTTTTGATGGCTGTAAACCTTTCTTAAAAATTGGATGATTTTAT
• Tissue: pods
• Gene name: LI_gene_176942;
• Additional information: details;

Expression of Ll_transcript_344198

FPKM

• PAB: 1.6
• PNAB: 10.8
• PS1: 12.8
• PS2: 11.5
• PS3: 12.6
• PW1: 7.2
• PW2: 5.4
• PW3: 3.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_344198

• Blastp: Probable inactive histone-lysine N-methyltransferase SUVR2 from Arabidopsis with 38.63% of identity
• Blastx: Probable inactive histone-lysine N-methyltransferase SUVR2 from Arabidopsis with 42.53% of identity
• Eggnog: Histone-lysine N-methyltransferase(COG2940)
• Kegg: Link to kegg annotations (AT5G43990)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019440971.1)
• Pfam: Ubiquitin-binding WIYLD domain (PF10440.8)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;