| Id Trinity | TRINITY_DN50404_c0_g3_i3 |
|---|---|
| Name Transcript | Ll_transcript_345574 |
| Sequence | CTAAAGGCCAAATAAACCAAAGAAAAGAGAGGTGGTATAGCTGGCAGCTTGTCCCAAAAATCCTTAACCTATCATTCCTATGATTGACAGTTTACAATTT TACATATTTCATGTTTCATACCTTAGTCATAATATTTCTTCTATCTTTACTTCCATCATCTTAATTGGTGAAGAAACTAATCATTTTCTTTGATTAAATC AATCAATCATGTAACAATTCTAGTTTTCATAATTAGTCTTTCAAAGAAAATATGATTTGCCACTCAAGAGGAAAGTGAAATGCCATCCATTGTGTTTGTT CTGTCTCCTTAAAAAATGGATTCATTTCTTCATCTATTCATAAACTTATTCATTATACTTCATTTTTACAAATTAATTTGACTATTAAGATCGTAGTACT TTTGCAGGCATTCTGTTGGAAGACCTGCCCCATCAGCATCTCTTGATCTAAAGCCTTCAGCTTTTGATCCCAAGGAGAAAGTTTGGACAAGATTTCCTCC CGACGGATCGAAATATACTCCACCACATCCGTCGTGTGAGTTCAAGTGGAAGGACTATTGCCCGGTAGTTTTCAGGACCCTTCGGAAGCTATTTAAAGTC GATGCAGCCGATTACATGTTATCCATATGTGGAAATGATGCCCTTCGCGAACTTTCCTCTCCTGGCAAAAGTGGCAGCTTCTTTTACTTGACAAATGATG ATCGTTACATGATTAAGACAATGAAGAAAGCTGAAGCAAAAGCTCTTTTGAGAATGCTTCCAGCTTATTACAATCATTTCCGAGCATTCGAAAATTCTCT ACTTACAAAGTTTTATGGTCTACATTGTGTAAAGTTAACTGGAACTGCTCAGAAGAAGGTTCGCTTTATCATAATGGGCAATCTCTTCTGTTCTGAGTAT ACCATTCATAGACGTTTCGATTTGAAGGGTTCGTCACTTGGTCGCATAACAGATAAGCCTGAGTCTGATATTAGTGAAACGACTATCCTTAAAGATCTTG ACCTAAACTTTATATTTCAACTGCAAAGGACTTGGTTCCAAGAGTTTCGCAGGCAAATTGATAGGGATTGTGAGCTTCTAGAGCAGGAGGGAATCATGGA CTATAGTTTGTTGGTTGGTATTCATTTCAGAGATATATCAACAGATGGGGATCTTATTCCTTCAGGATCTCAAACTCCTGGTGGCGATAGCGAAGCAACA CTTTGTATTTCAAGAGCAGATGTGGATCAACTTCTTCTAGACCCTTCCAGGTGGGCTAATATCAAATTGGGTTTGAATATGCCAGCAAAGGTCGAAAGGA CAGTGAGACGAAGCGATTGTGAATTACAACTTGTTGGAGAACCAATTGGAGAGTTCTATGAGGTTGTATTGTTTTTTGGTATCATAGACATACTTCAAGA CTATGACATCAGCAAGAAGCTTGAACATGCCTATAAATCCATTCAATATGACCCAACCTCAATATCAGCTGTTGACCCTAGACAATACTCGAAACGTTTT CGTGACTTCATATTCAGAGTATTTTCTGAAGATTCTTGAAAGGATTACATGCATGATTCTGTATTTCTTATGTGCATTCTTATAATCAAGAGGCGAATAG GGTATCTGGTTGCTTCAAACGCAAGTAACACCCCTATTACCCTTCTTTGGTACCCTTTGAAATCTTCAACTTCAAGTAACTGACTTTGGGTACCATTTCA ATTCTTTCAATTTTATTTTCATCTAAATTACCTTCATTATGTGTATAGTATACATGAAAACAACACATGATGCAGAATGTTGAAAGCAAGACCAACTCTA TGCATGATGCATGCATGCATCTTTTACTCCTTTGCAAGAATATGGTGTCTTTTCTCCCAAATATGGAGAAAAGGTGATAATGAGTTTCAACATTTTGTAT CATTATGAGATGTATATTTATAGAGAAATGTTAGATCAATGTACATGTTCAATTTTTTATTTCTTTAATCCTCATTGATGCTATTAGCTTTTGGGTTG BLAST |
| Tissue | pods |
| Gene name | LI_gene_176960; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_345574
| Blastp | Phosphatidylinositol 4-phosphate 5-kinase 4 from Arabidopsis with 79.94% of identity |
|---|---|
| Blastx | Phosphatidylinositol 4-phosphate 5-kinase 4 from Arabidopsis with 80.21% of identity |
| Eggnog | whole genome shotgun sequence(COG4642) |
| Kegg | Link to kegg annotations (AT3G56960) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019429714.1) |
| Pfam | Phosphatidylinositol-4-phosphate 5-Kinase (PF01504.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |