| Id Trinity | TRINITY_DN50410_c1_g1_i17 |
|---|---|
| Name Transcript | Ll_transcript_346696 |
| Sequence | CGCTCTTAGATGAACAAATCGTCACACTATTCATAAATTTGAGTCTTTTCTTGAAAGAGAAAAATATATATAACTCGTTAATTAACACATAAAAAATGTT TTTTCCCTTCAACTCAACGCCTGACCAGTGCTGACGGTACACGCATTCCCTCCCCCTCTCTCTCTTCACTCCATTCCCCATATCCTTTTTGGATCTCCCT TCTTTCTCTTCATCTCTTAGGTATTTCCCCTTTTCCCTTTCTACTATTCACTCATTTCTCACCATTAATCAACACTAACTATTCATTTTTATTACTTATA TAAACATTTACATATTTTAATTCATAAATTTTCGTCACCATAGAGAGAGAGAAGCATCATCGTGGTGATTGATTCTTGATTTGAAATTCTTCAATGGCTA CTCAACCTGCTAGACCTCGTGCCGATTACGATTACCTTATAAAGCTTCTTCTCATCGGCGATAGCGGGGTGGGTAAAAGTTGTCTTCTATTGCGTTTCTC AGATGGGTCTTTTACAACTAGTTTTATCACAACCATTGGCATTGATTTCAAAATAAGGACTATAGAGCTTGATGGAAAGCGGATCAAATTGCAAATATGG GATACAGCTGGTCAAGAGCGGTTTCGAACTATTACAACTGCTTATTACCGTGGAGCCATGGGTATTTTGCTTGTATATGACGTGACTGATGAATCTTCTT TTAACAACATTAAGAATTGGATTCGTAACATTGAGCAGCATGCTTCTGACAATGTCAACAAGATCCTGGTGGGTAACAAGGCTGACATGGATGAAAGCAA ACGGGCTGTGCCAACTTCTAAGGGTCAAGCTCTTGCAGATGAGTATGGTATCAAATTTTTTGAGACTGTAAGTAACTTCCATTGCTCTTATTGAAATTGC ATGCATGCATAAGTTGTTGATCTGTTAATTCTGAGTTTATGCCTGTATAGAGTGCTAAAACAAATTTGAACGTGGAAGAGGTTTTCTTTTCAATAGCTCG GGACATCAAGCAAAGACTTGCAGATACTGACTCAAAATCTGAGGTTTGGTTTTGATCTTTCATACTAATTATAGTTTATTGTATTGTGAGCTGAGCTGTG AGCATGTGACTGTTTTTGCAATAATTTGCTAGGTTGTAGGGCCCAAAAATTAAAAAAGATTAATACATTGAGAAAAGGGGTAGGATAGTTAGCACATGAT TAGATAGAGTTCATTAATAATTCAGTTTTTAGAATATTCTTAGAGTCTGTTTGCGAGTTGAGTTTTGGAGGGGATGAAGGGAAAACAGAGGCTTCAAAGT CATCTCACAATTGTATCTCATCACTTCCAAACCTTTCCATGCCTTCCATTATGCCCCAAATACTAGCTCGCAAGCTGACCTTAATTTGAGAGCTGAGTTT TGGAGGGGAGGAAAGAGAAGGTTTATCAATTTCCTTTCCCTACAGAGTCTAACTCAAACAATTCCTCATGGTCCTATTTAAGCATTGTACTTCCTATATT ATGAGTCAGTGAAATAAGAAATTATATTATTTTATTGGTGTTGTTATATTCTTCACTAGTAGTAGTCGTAAAACGTAGTTTCTTGGTAGGGGGCTATTTC TATTTGCAACCTATCAAATTTTCTGAATGACTTCAATGCAATTAAACGCAAGACTCATCATGAATGTGGTTGGTTTCATTCACAAAACCGTTGTTTCCAT TTTTTATGGAATGGGGTGAATAATAAGTTGGTTCTATCTAATCCCATTTCATCAACCAATGATTGCGCATGAGATTCCATTCTATTTTAAACAGTTAAAT AACGGAACCTACTAACATTACATTCCATTATACTTAATGCCATTCATTTATGGATCCTAACATTGCTTATTAAATTGAATTATCTCTTCATCTGTCCACT GAGATTTTATTTGGTACCTTTTGCAGCCCCAGACAATCAAGATTAACCAAGCAAATCAGGGAGCAGGGGCTTCTGAGGCTGCCCAAAAATCTGCTTGCTG TGGTT BLAST |
| Tissue | pods |
| Gene name | LI_gene_177001; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_346696
| Blastp | Ras-related protein RAB1BV from Beta with 98.65% of identity |
|---|---|
| Blastx | Ras-related protein RABE1d from Arabidopsis with 93.04% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (104900163) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019426344.1) |
| Pfam | ADP-ribosylation factor family (PF00025.20) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |