Ll_transcript_345191

• Id Trinity: TRINITY_DN50411_c0_g1_i1
• Name Transcript: Ll_transcript_345191
• Sequence: CACGTAAGAATGGAAATTAAATTCCCCAAAGCTATGTGGTTGAAAGATAATGATTGATACTATTATTAAACAATAGAAGTGTGAGTGTAGTAGCTGAGTG AGAGATAGATAGATCCTCTGTCTCTGTCTTTGAGAATCAACCAATTCAATTCAAATTTCAATTCAAATTTGAATTCAAATTTCAATTCAAATTTCAATTC AATCCATTCCAAATGGGAGAGTTAGCTCGTGGAGGTTGTTGTCCTCCGATGGATCTGTTCCGTTCAGAACCGATGCAGCTTCTTCAGCTCATCATTCCAA TCGAATCCGCTCATCTCACCGTTTCTTATCTCGGCGAACTTGGACTCCTTCAGTTCAAAGATCTGAATACAGACAAGAGCCCTTTTCAACGGACTTATGC TGCTCAGATAAAAAGATGTGGAGAGATGGCTCGTAAATTACGTTTTTTCAAGGAGCAAATGTTGAAGGCAGATGTTTTACCAGTACATTCTACAACAGTG GTTGATGTGAACATTGATGATCTTGAGGTAAAACTTGCTGAAATTGAGTCAGAGTTAACCGAGATGAATGCAAATGGCGAAAAGTTGCAACGCTCTTACA ATGAACTTGTGGAGTATAAGCTTGTTCTGGAGAAGGCTGGTGAATTTTTCCACACTGCTCAAAGCCGTGCCATAGAGCAGCAGAGAGAAAATGAATCACG CCAACTGGTTGATGAATCTTTGGAAACACCTTTATTGCAAGACCAAGAATTGGTAGGTGATTCATCGAAGCAAGTTAAATTGGGCTTTTTAGCTGGTCTT GTTGCCAGGGAAAAGTCTGTGGCATTTGAGAGAATTTTATTTCGTGCCACCAGAGGCAATGTGTTTTTGAGGCAGTCTGCTGTTGAGAATCCTGTCACAG ATCCGGTTACTGGAGAAAAGACTGAGAAAAATGTATTTGTGGTCTTCTATGCTGCCGAAAAAGCGAAATCCAAGATTCTGAAAATATGTGACGCCTTTGG CGCTAATCGTTACCCTTTTGCAGAGGATGTTGGAAAACAAACTGAAATGATAAAAGAGGTATCCCGAAGAATTTTAGAATTGAAGACAACAATAGATGCT GGACTGCTGCATCGGGCTACCTTGCTACAGACTATTGGTGATCAATTTGAGCAATGGAATCTTTTGGTGAGGAAGGAGAAATCTATTTACCATACCCTGA ACATGCTAAGCCTTGATGTGACGAAAAAATGTCTTGTGGCTGAAGGGTGGAGTCCTGTTTTTGCAACAAAGCAGATCCAAGATGCCTTACACCGGGCAGC AATTGACGCTAACTCTCAAGTTAGTGCCATTTTGCAAGTTCTGCATACTAGAGAGTTGCCACCTACATATTTCCGTACAAACAAATTTACTTCCTCATTT CAAGGAATTATTGATTCATATGGGGTTGCGAAGTATCAAGAGGCAAATCCTACTGTGTACACTGTAGTTACCTTTCCATTTCTTTTTGCTGTTATGTTTG GTGATTGGGGACATGGAATATGTATACTACTGGCTGCTCTATATTTCATAATTCGGGAGAAGAAACTTTCTAGCCAGGTAACCTTTTATTTTACAATGAA AATTCTTCCTTCTATGAAAGTATTAAAAAGAAATGTTATATTTTGATGGGAAAAGTTAGATTGATTTTCTCTACTTTTTGTCTAAAATGTCTTATTAGAT GTCTCATGCTATATATGCATGATAGATCTATATGCAGGAACATATTTAGACCATGTTGGTAAATAATCTTGGTATTTTGACAAGGTTAGAATCCTTATGG ATTAATGAAAACCTTTGGAAATCTTTTGTGGTAACAGTTCTTTATGGCAACCACAGAACTCTTCCATAGCATATTCAGTAATTTAATAATTTTCAAAGGT TCATATTGCTGCCTGATAAGTGAGACAATTTTCAAGTGTGTGGAACACTGCTCTTTTCAACACCATGCACCAAGAGTGCTTGAATTCATTGAAATCAGTG GTTTTTGTTACTGTAAAAAGGCCATATTTTTTGTGTATTAGTTTAGATGGTCACCCTCCCTATTGAATTTTGTAATTGTTGCAAAATGCAACAGACTTAC CAACTAAGGCAACTGGCACCTTTGTCCATATTCCATTGTTGCTATTAACCAGATGATGAAAAAAGTCTGTAAAATCTGTTGATTGACATTTGACAGTTCG TTTGCCATCAATTTCTGCCCAGTAGTGTTTTATTTTTGTTCCTCTTGCATAAATATATTTCAAGGCCTTTTTTGTTTATAAAAACAGTTTTCTAACATTA AATCTTTTGGTGATAAACAGAAGCTTGATGACATCACAGACATGACTTTTGGAGGACGTTATGTTATTTTAATGATGGCAATCTTTTCAATCTACACTGG TTTCATATATAATGAGTTCTTCTCTGTCTCATTTGAAATCTTTGGTCCTTCTGCCTATGAATGTCGTGATCTGTCTTGCACGGAAGCTACAACAGTGGGC CTGATAAAAGCGCGTCGTACTTACCCATTTGGTGTGGATCCTGTATGGCATGGTTCACGAAGTGAATTACCATTTCTAAACTCCTTGAAAATGAAAATGT CCATTCTTCTTGGGGTTGCTCAAATGAACCTTGGAATTATAATGAGCTTTTGTAATGCTAAATTCTTTAAGAACAGCGTAAATGTATGGTTCCAGTTTGT TCCCCAGATAATATTTCTCAACGGTCTATTTGGCTACCTATCCCTTCTTATTATTGTGAAGTGGTGCACTGGTTCTCAAGCTGATTTGTATCATATATTG ATCTACATGTTCCTGAGCCCGACAGATGATTTGGGTGAAAACCAACTCTTCGTTGGTCAGAAATATCTGCAGATTACACTTTTGATTCTGGCCTTTATCG CTGTGCCTTGGATGCTGATCCCAAAACCTTTTATTTTGAAGAAGCAACATGAAAATAGGCACGGGGTTGAATCTTATGCACCACTTCAAACGACAGAGGA AAGCTTGCAAGTAGAGTCAACTCATGATTCCCATGGTCATGAGGAATTTGAGTTCAGTGAAGTCTTTGTACATCAACTCATACACACCATAGAGTTCGTA CTTGGAGCAGTTTCTAATACAGCTTCTTACCTTCGTCTATGGGCCCTTAGTCTTGCTCATTCAGAGTTATCAACTGTGTTCTATGAGAAGGTTCTTCTAA TGGCATATGGGTACAATAATGTGGCTATCCTGATAGTTGGTCTGATTGTGTTCATTTTCGCTACCGTTGGAGTGTTGCTTGTGATGGAAACATTGAGTGC CTTCTTGCATGCTTTACGTCTTCACTGGGTGGAGTTCCAGAACAAGTTTTATGAAGGAGATGGTTACAAGTTCCACCCTTTCTCCTTCTTATTGGTAGAA GATGAGGATGAGTGAATAAGGTGTTGTATTGTTATGTTACTACCTTTGCACCTTTACTTATTATTTCGTATGCGGGGTGTAATGGTGGAATTCTTGGAGC TTTTTGGTCCAACACCATTCCGTATCTTATTTATTTATGCATTTGGGTGGGGAAATAAATATTATATTATGATATTCTAGGCTGGCATGGCATGGCAGTG TAATAACTACAATATAACTTAATATTTATGTGCTTTTTGCCTTAAAAAATTGATCGATATTTAATATGCTGGTATCATAAGATGCATGCTTTTGTCATAA AAAAGTTGATCTAGTCGTGTCCGTCTATCAACGTGTGGCATCAGCAGTGCCCCTCTTTTATGTACAAAATATA
• Tissue: pods
• Gene name: LI_gene_177010;
• Additional information: details;

Expression of Ll_transcript_345191

FPKM

• PAB: 0
• PNAB: 1.5
• PS1: 2.4
• PS2: 1.3
• PS3: 3.8
• PW1: 3.6
• PW2: 1.4
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_345191

• Blastp: V-type proton ATPase subunit a3 from Arabidopsis with 73.03% of identity
• Blastx: V-type proton ATPase subunit a3 from Arabidopsis with 73.03% of identity
• Eggnog: ATPase 116 kDa subunit(COG1269)
• Kegg: Link to kegg annotations (AT4G39080)
• CantataDB: Link to cantataDB annotations (CNT0001114)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019454213.1)
• Pfam: V-type ATPase 116kDa subunit family (PF01496.18)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;